Protein–RNA interactions for Protein: Q8CE47

Slc49a3, Solute carrier family 49 member A3, mousemouse

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc49a3Q8CE47 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.02□□□□□ -0.33
Slc49a3Q8CE47 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.02□□□□□ -0.33
Slc49a3Q8CE47 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc49a3Q8CE47 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc49a3Q8CE47 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc49a3Q8CE47 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc49a3Q8CE47 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc49a3Q8CE47 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.02□□□□□ -0.33
Slc49a3Q8CE47 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc49a3Q8CE47 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Slc49a3Q8CE47 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Slc49a3Q8CE47 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc49a3Q8CE47 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc49a3Q8CE47 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc49a3Q8CE47 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Slc49a3Q8CE47 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc49a3Q8CE47 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Slc49a3Q8CE47 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc49a3Q8CE47 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Slc49a3Q8CE47 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc49a3Q8CE47 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc49a3Q8CE47 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc49a3Q8CE47 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Slc49a3Q8CE47 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Slc49a3Q8CE47 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc49a3Q8CE47 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.01□□□□□ -0.33
Slc49a3Q8CE47 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Slc49a3Q8CE47 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Slc49a3Q8CE47 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.01□□□□□ -0.33
Slc49a3Q8CE47 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.01□□□□□ -0.33
Slc49a3Q8CE47 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.01□□□□□ -0.33
Slc49a3Q8CE47 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc49a3Q8CE47 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.01□□□□□ -0.33
Slc49a3Q8CE47 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Slc49a3Q8CE47 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.01□□□□□ -0.33
Slc49a3Q8CE47 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc49a3Q8CE47 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.01□□□□□ -0.33
Slc49a3Q8CE47 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Slc49a3Q8CE47 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc49a3Q8CE47 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc49a3Q8CE47 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc49a3Q8CE47 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc49a3Q8CE47 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Slc49a3Q8CE47 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13□□□□□ -0.33
Slc49a3Q8CE47 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Gm28033-201ENSMUST00000184224 96 ntBASIC13□□□□□ -0.33
Slc49a3Q8CE47 Gm8597-201ENSMUST00000191525 1109 ntBASIC13□□□□□ -0.33
Slc49a3Q8CE47 Gm6089-201ENSMUST00000197666 938 ntBASIC13□□□□□ -0.33
Slc49a3Q8CE47 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 AC154595.3-201ENSMUST00000224579 384 ntBASIC13□□□□□ -0.33
Slc49a3Q8CE47 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13□□□□□ -0.33
Slc49a3Q8CE47 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13□□□□□ -0.33
Slc49a3Q8CE47 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Gm9924-202ENSMUST00000192760 2311 ntBASIC13□□□□□ -0.33
Slc49a3Q8CE47 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc49a3Q8CE47 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Slc49a3Q8CE47 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms