Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.5■□□□□ 0.23
Vps53Q8CCB4 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps53Q8CCB4 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps53Q8CCB4 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Vps53Q8CCB4 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps53Q8CCB4 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Vps53Q8CCB4 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.5■□□□□ 0.23
Vps53Q8CCB4 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Vps53Q8CCB4 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.5■□□□□ 0.23
Vps53Q8CCB4 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.5■□□□□ 0.23
Vps53Q8CCB4 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Vps53Q8CCB4 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Vps53Q8CCB4 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps53Q8CCB4 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Vps53Q8CCB4 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps53Q8CCB4 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps53Q8CCB4 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps53Q8CCB4 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps53Q8CCB4 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps53Q8CCB4 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps53Q8CCB4 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps53Q8CCB4 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps53Q8CCB4 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps53Q8CCB4 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps53Q8CCB4 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.49■□□□□ 0.23
Vps53Q8CCB4 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps53Q8CCB4 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.49■□□□□ 0.23
Vps53Q8CCB4 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.49■□□□□ 0.23
Vps53Q8CCB4 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps53Q8CCB4 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Vps53Q8CCB4 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps53Q8CCB4 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps53Q8CCB4 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.49■□□□□ 0.23
Vps53Q8CCB4 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.49■□□□□ 0.23
Vps53Q8CCB4 Gm15483-201ENSMUST00000120338 456 ntBASIC16.49■□□□□ 0.23
Vps53Q8CCB4 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Vps53Q8CCB4 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.49■□□□□ 0.23
Vps53Q8CCB4 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.49■□□□□ 0.23
Vps53Q8CCB4 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vps53Q8CCB4 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Vps53Q8CCB4 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vps53Q8CCB4 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Vps53Q8CCB4 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps53Q8CCB4 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps53Q8CCB4 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps53Q8CCB4 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Vps53Q8CCB4 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vps53Q8CCB4 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps53Q8CCB4 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps53Q8CCB4 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.49■□□□□ 0.23
Vps53Q8CCB4 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps53Q8CCB4 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps53Q8CCB4 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Vps53Q8CCB4 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps53Q8CCB4 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.48■□□□□ 0.23
Vps53Q8CCB4 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps53Q8CCB4 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Vps53Q8CCB4 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps53Q8CCB4 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps53Q8CCB4 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps53Q8CCB4 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps53Q8CCB4 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps53Q8CCB4 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Vps53Q8CCB4 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Vps53Q8CCB4 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vps53Q8CCB4 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps53Q8CCB4 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps53Q8CCB4 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps53Q8CCB4 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vps53Q8CCB4 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vps53Q8CCB4 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.48■□□□□ 0.23
Vps53Q8CCB4 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vps53Q8CCB4 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.48■□□□□ 0.23
Vps53Q8CCB4 Gm8116-201ENSMUST00000182917 1201 ntBASIC16.48■□□□□ 0.23
Vps53Q8CCB4 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vps53Q8CCB4 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vps53Q8CCB4 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps53Q8CCB4 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vps53Q8CCB4 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Vps53Q8CCB4 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Vps53Q8CCB4 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps53Q8CCB4 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps53Q8CCB4 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps53Q8CCB4 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps53Q8CCB4 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vps53Q8CCB4 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps53Q8CCB4 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps53Q8CCB4 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps53Q8CCB4 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
Vps53Q8CCB4 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps53Q8CCB4 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vps53Q8CCB4 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps53Q8CCB4 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps53Q8CCB4 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps53Q8CCB4 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vps53Q8CCB4 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Vps53Q8CCB4 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps53Q8CCB4 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps53Q8CCB4 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vps53Q8CCB4 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms