Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup54Q8BTS4 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup54Q8BTS4 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup54Q8BTS4 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup54Q8BTS4 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Nup54Q8BTS4 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Nup54Q8BTS4 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Nup54Q8BTS4 Gm29667-201ENSMUST00000190817 490 ntBASIC14.49□□□□□ -0.09
Nup54Q8BTS4 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nup54Q8BTS4 Gm37714-201ENSMUST00000194742 342 ntBASIC14.49□□□□□ -0.09
Nup54Q8BTS4 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.49□□□□□ -0.09
Nup54Q8BTS4 Gm18027-201ENSMUST00000218947 619 ntBASIC14.49□□□□□ -0.09
Nup54Q8BTS4 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Nup54Q8BTS4 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup54Q8BTS4 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup54Q8BTS4 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup54Q8BTS4 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup54Q8BTS4 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Nup54Q8BTS4 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup54Q8BTS4 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup54Q8BTS4 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Nup54Q8BTS4 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.49□□□□□ -0.09
Nup54Q8BTS4 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Nup54Q8BTS4 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nup54Q8BTS4 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Syt7-204ENSMUST00000223586 1344 ntBASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nup54Q8BTS4 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.48□□□□□ -0.09
Nup54Q8BTS4 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup54Q8BTS4 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup54Q8BTS4 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup54Q8BTS4 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.47□□□□□ -0.09
Nup54Q8BTS4 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup54Q8BTS4 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup54Q8BTS4 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup54Q8BTS4 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Nup54Q8BTS4 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nup54Q8BTS4 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup54Q8BTS4 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.47□□□□□ -0.09
Nup54Q8BTS4 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup54Q8BTS4 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup54Q8BTS4 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Nup54Q8BTS4 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nup54Q8BTS4 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup54Q8BTS4 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.47□□□□□ -0.09
Nup54Q8BTS4 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup54Q8BTS4 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.47□□□□□ -0.09
Nup54Q8BTS4 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Nup54Q8BTS4 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup54Q8BTS4 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup54Q8BTS4 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup54Q8BTS4 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup54Q8BTS4 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Nup54Q8BTS4 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.47□□□□□ -0.09
Nup54Q8BTS4 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Nup54Q8BTS4 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup54Q8BTS4 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup54Q8BTS4 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup54Q8BTS4 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup54Q8BTS4 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nup54Q8BTS4 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Nup54Q8BTS4 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup54Q8BTS4 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup54Q8BTS4 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup54Q8BTS4 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.46□□□□□ -0.09
Nup54Q8BTS4 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup54Q8BTS4 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 465.5 ms