Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.99□□□□□ -0.01
Rd3Q8BRE0 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rd3Q8BRE0 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rd3Q8BRE0 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rd3Q8BRE0 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rd3Q8BRE0 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.99□□□□□ -0.01
Rd3Q8BRE0 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Rd3Q8BRE0 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rd3Q8BRE0 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Rd3Q8BRE0 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.99□□□□□ -0.01
Rd3Q8BRE0 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.99□□□□□ -0.01
Rd3Q8BRE0 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rd3Q8BRE0 Gm4804-201ENSMUST00000182234 999 ntBASIC14.99□□□□□ -0.01
Rd3Q8BRE0 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.99□□□□□ -0.01
Rd3Q8BRE0 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rd3Q8BRE0 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Rd3Q8BRE0 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rd3Q8BRE0 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rd3Q8BRE0 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rd3Q8BRE0 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rd3Q8BRE0 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.99□□□□□ -0.01
Rd3Q8BRE0 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rd3Q8BRE0 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Rd3Q8BRE0 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Rd3Q8BRE0 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rd3Q8BRE0 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rd3Q8BRE0 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rd3Q8BRE0 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rd3Q8BRE0 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.98□□□□□ -0.01
Rd3Q8BRE0 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rd3Q8BRE0 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rd3Q8BRE0 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rd3Q8BRE0 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Rd3Q8BRE0 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rd3Q8BRE0 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Rd3Q8BRE0 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rd3Q8BRE0 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
Rd3Q8BRE0 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.98□□□□□ -0.01
Rd3Q8BRE0 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rd3Q8BRE0 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rd3Q8BRE0 Gm13829-201ENSMUST00000119600 138 ntBASIC14.98□□□□□ -0.01
Rd3Q8BRE0 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.98□□□□□ -0.01
Rd3Q8BRE0 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.98□□□□□ -0.01
Rd3Q8BRE0 Gm28911-201ENSMUST00000188837 117 ntBASIC14.98□□□□□ -0.01
Rd3Q8BRE0 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rd3Q8BRE0 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rd3Q8BRE0 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.98□□□□□ -0.01
Rd3Q8BRE0 Gm5279-201ENSMUST00000199575 745 ntBASIC14.98□□□□□ -0.01
Rd3Q8BRE0 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rd3Q8BRE0 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.98□□□□□ -0.01
Rd3Q8BRE0 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rd3Q8BRE0 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rd3Q8BRE0 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rd3Q8BRE0 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rd3Q8BRE0 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rd3Q8BRE0 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Rd3Q8BRE0 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rd3Q8BRE0 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rd3Q8BRE0 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rd3Q8BRE0 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rd3Q8BRE0 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.98□□□□□ -0.01
Rd3Q8BRE0 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rd3Q8BRE0 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rd3Q8BRE0 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.97□□□□□ -0.01
Rd3Q8BRE0 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rd3Q8BRE0 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rd3Q8BRE0 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Rd3Q8BRE0 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rd3Q8BRE0 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rd3Q8BRE0 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.97□□□□□ -0.01
Rd3Q8BRE0 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Rd3Q8BRE0 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rd3Q8BRE0 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rd3Q8BRE0 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rd3Q8BRE0 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rd3Q8BRE0 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rd3Q8BRE0 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rd3Q8BRE0 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rd3Q8BRE0 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Rd3Q8BRE0 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.97□□□□□ -0.01
Rd3Q8BRE0 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.97□□□□□ -0.01
Rd3Q8BRE0 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.97□□□□□ -0.01
Rd3Q8BRE0 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rd3Q8BRE0 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rd3Q8BRE0 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rd3Q8BRE0 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rd3Q8BRE0 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rd3Q8BRE0 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rd3Q8BRE0 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rd3Q8BRE0 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rd3Q8BRE0 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.97□□□□□ -0.01
Rd3Q8BRE0 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rd3Q8BRE0 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.97□□□□□ -0.01
Rd3Q8BRE0 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rd3Q8BRE0 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rd3Q8BRE0 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rd3Q8BRE0 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rd3Q8BRE0 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Rd3Q8BRE0 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rd3Q8BRE0 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms