Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Depdc1bQ8BH88 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Depdc1bQ8BH88 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Depdc1bQ8BH88 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Depdc1bQ8BH88 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Depdc1bQ8BH88 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Depdc1bQ8BH88 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Depdc1bQ8BH88 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Depdc1bQ8BH88 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.43■□□□□ 0.06
Depdc1bQ8BH88 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Depdc1bQ8BH88 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Depdc1bQ8BH88 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Depdc1bQ8BH88 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Depdc1bQ8BH88 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Depdc1bQ8BH88 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.43■□□□□ 0.06
Depdc1bQ8BH88 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Depdc1bQ8BH88 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.43■□□□□ 0.06
Depdc1bQ8BH88 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.43■□□□□ 0.06
Depdc1bQ8BH88 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Depdc1bQ8BH88 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Depdc1bQ8BH88 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Depdc1bQ8BH88 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Depdc1bQ8BH88 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Depdc1bQ8BH88 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Depdc1bQ8BH88 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Depdc1bQ8BH88 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC15.43■□□□□ 0.06
Depdc1bQ8BH88 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.43■□□□□ 0.06
Depdc1bQ8BH88 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Depdc1bQ8BH88 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Depdc1bQ8BH88 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Depdc1bQ8BH88 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Depdc1bQ8BH88 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Depdc1bQ8BH88 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Depdc1bQ8BH88 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Depdc1bQ8BH88 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Depdc1bQ8BH88 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Depdc1bQ8BH88 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Depdc1bQ8BH88 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Depdc1bQ8BH88 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.42■□□□□ 0.06
Depdc1bQ8BH88 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Depdc1bQ8BH88 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Depdc1bQ8BH88 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Depdc1bQ8BH88 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Depdc1bQ8BH88 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.42■□□□□ 0.06
Depdc1bQ8BH88 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Depdc1bQ8BH88 Gm9824-201ENSMUST00000178707 561 ntBASIC15.42■□□□□ 0.06
Depdc1bQ8BH88 Gm38225-201ENSMUST00000194001 393 ntBASIC15.42■□□□□ 0.06
Depdc1bQ8BH88 Gm5779-201ENSMUST00000218467 910 ntBASIC15.42■□□□□ 0.06
Depdc1bQ8BH88 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Depdc1bQ8BH88 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Depdc1bQ8BH88 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Depdc1bQ8BH88 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Depdc1bQ8BH88 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Depdc1bQ8BH88 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Depdc1bQ8BH88 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Depdc1bQ8BH88 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Depdc1bQ8BH88 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Depdc1bQ8BH88 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Depdc1bQ8BH88 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Depdc1bQ8BH88 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Depdc1bQ8BH88 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Depdc1bQ8BH88 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Depdc1bQ8BH88 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Depdc1bQ8BH88 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.42■□□□□ 0.06
Depdc1bQ8BH88 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.42■□□□□ 0.06
Depdc1bQ8BH88 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.41■□□□□ 0.06
Depdc1bQ8BH88 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Depdc1bQ8BH88 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Depdc1bQ8BH88 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Depdc1bQ8BH88 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Depdc1bQ8BH88 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.41■□□□□ 0.06
Depdc1bQ8BH88 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Depdc1bQ8BH88 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Depdc1bQ8BH88 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Depdc1bQ8BH88 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Depdc1bQ8BH88 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Depdc1bQ8BH88 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Depdc1bQ8BH88 Gm27622-201ENSMUST00000183779 60 ntBASIC15.41■□□□□ 0.06
Depdc1bQ8BH88 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.41■□□□□ 0.06
Depdc1bQ8BH88 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.41■□□□□ 0.06
Depdc1bQ8BH88 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Depdc1bQ8BH88 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Depdc1bQ8BH88 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Depdc1bQ8BH88 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Depdc1bQ8BH88 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Depdc1bQ8BH88 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Depdc1bQ8BH88 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Depdc1bQ8BH88 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC15.41■□□□□ 0.06
Depdc1bQ8BH88 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Depdc1bQ8BH88 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Depdc1bQ8BH88 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Depdc1bQ8BH88 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Depdc1bQ8BH88 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Depdc1bQ8BH88 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Depdc1bQ8BH88 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Depdc1bQ8BH88 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Depdc1bQ8BH88 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Depdc1bQ8BH88 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Depdc1bQ8BH88 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Depdc1bQ8BH88 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms