Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pif1Q80SX8 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pif1Q80SX8 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pif1Q80SX8 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pif1Q80SX8 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.11□□□□□ -0.31
Pif1Q80SX8 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.1□□□□□ -0.31
Pif1Q80SX8 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.1□□□□□ -0.31
Pif1Q80SX8 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Gm15393-201ENSMUST00000120499 219 ntBASIC13.1□□□□□ -0.31
Pif1Q80SX8 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Pif1Q80SX8 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.1□□□□□ -0.31
Pif1Q80SX8 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Gm18624-201ENSMUST00000220966 658 ntBASIC13.1□□□□□ -0.31
Pif1Q80SX8 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.1□□□□□ -0.31
Pif1Q80SX8 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pif1Q80SX8 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.09□□□□□ -0.31
Pif1Q80SX8 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Pif1Q80SX8 BC001981-202ENSMUST00000191393 1545 ntBASIC13.09□□□□□ -0.31
Pif1Q80SX8 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pif1Q80SX8 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pif1Q80SX8 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pif1Q80SX8 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pif1Q80SX8 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pif1Q80SX8 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pif1Q80SX8 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pif1Q80SX8 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pif1Q80SX8 Gm11918-201ENSMUST00000121660 179 ntBASIC13.09□□□□□ -0.31
Pif1Q80SX8 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.09□□□□□ -0.31
Pif1Q80SX8 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.09□□□□□ -0.31
Pif1Q80SX8 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Pif1Q80SX8 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.09□□□□□ -0.31
Pif1Q80SX8 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.09□□□□□ -0.31
Pif1Q80SX8 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pif1Q80SX8 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pif1Q80SX8 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pif1Q80SX8 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pif1Q80SX8 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pif1Q80SX8 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pif1Q80SX8 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
Pif1Q80SX8 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Pif1Q80SX8 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pif1Q80SX8 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Pif1Q80SX8 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pif1Q80SX8 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pif1Q80SX8 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.09□□□□□ -0.31
Pif1Q80SX8 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pif1Q80SX8 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pif1Q80SX8 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pif1Q80SX8 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Pif1Q80SX8 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Pif1Q80SX8 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pif1Q80SX8 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.08□□□□□ -0.31
Pif1Q80SX8 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Pif1Q80SX8 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pif1Q80SX8 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pif1Q80SX8 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pif1Q80SX8 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pif1Q80SX8 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pif1Q80SX8 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pif1Q80SX8 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms