Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Smarcc2Q6PDG5 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcc2Q6PDG5 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcc2Q6PDG5 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcc2Q6PDG5 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcc2Q6PDG5 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Smarcc2Q6PDG5 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcc2Q6PDG5 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcc2Q6PDG5 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.54■□□□□ 0.24
Smarcc2Q6PDG5 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC16.54■□□□□ 0.24
Smarcc2Q6PDG5 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Smarcc2Q6PDG5 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcc2Q6PDG5 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcc2Q6PDG5 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcc2Q6PDG5 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Smarcc2Q6PDG5 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcc2Q6PDG5 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcc2Q6PDG5 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcc2Q6PDG5 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcc2Q6PDG5 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcc2Q6PDG5 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcc2Q6PDG5 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcc2Q6PDG5 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcc2Q6PDG5 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcc2Q6PDG5 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcc2Q6PDG5 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.53■□□□□ 0.24
Smarcc2Q6PDG5 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcc2Q6PDG5 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcc2Q6PDG5 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.53■□□□□ 0.24
Smarcc2Q6PDG5 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.53■□□□□ 0.24
Smarcc2Q6PDG5 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcc2Q6PDG5 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcc2Q6PDG5 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcc2Q6PDG5 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.53■□□□□ 0.24
Smarcc2Q6PDG5 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcc2Q6PDG5 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcc2Q6PDG5 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.24
Smarcc2Q6PDG5 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcc2Q6PDG5 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcc2Q6PDG5 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcc2Q6PDG5 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Smarcc2Q6PDG5 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcc2Q6PDG5 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcc2Q6PDG5 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcc2Q6PDG5 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcc2Q6PDG5 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Smarcc2Q6PDG5 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.52■□□□□ 0.24
Smarcc2Q6PDG5 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC16.52■□□□□ 0.24
Smarcc2Q6PDG5 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.52■□□□□ 0.24
Smarcc2Q6PDG5 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.52■□□□□ 0.24
Smarcc2Q6PDG5 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcc2Q6PDG5 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.52■□□□□ 0.24
Smarcc2Q6PDG5 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcc2Q6PDG5 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcc2Q6PDG5 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcc2Q6PDG5 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcc2Q6PDG5 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Smarcc2Q6PDG5 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smarcc2Q6PDG5 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Smarcc2Q6PDG5 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.23
Smarcc2Q6PDG5 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.52■□□□□ 0.23
Smarcc2Q6PDG5 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smarcc2Q6PDG5 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smarcc2Q6PDG5 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smarcc2Q6PDG5 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Smarcc2Q6PDG5 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Smarcc2Q6PDG5 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smarcc2Q6PDG5 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smarcc2Q6PDG5 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcc2Q6PDG5 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcc2Q6PDG5 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcc2Q6PDG5 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcc2Q6PDG5 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcc2Q6PDG5 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcc2Q6PDG5 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcc2Q6PDG5 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Smarcc2Q6PDG5 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcc2Q6PDG5 Gm13823-201ENSMUST00000119930 345 ntBASIC16.51■□□□□ 0.23
Smarcc2Q6PDG5 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcc2Q6PDG5 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcc2Q6PDG5 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Smarcc2Q6PDG5 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcc2Q6PDG5 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcc2Q6PDG5 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.51■□□□□ 0.23
Smarcc2Q6PDG5 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcc2Q6PDG5 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Smarcc2Q6PDG5 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcc2Q6PDG5 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcc2Q6PDG5 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcc2Q6PDG5 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcc2Q6PDG5 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC16.51■□□□□ 0.23
Smarcc2Q6PDG5 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.51■□□□□ 0.23
Smarcc2Q6PDG5 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcc2Q6PDG5 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcc2Q6PDG5 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcc2Q6PDG5 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcc2Q6PDG5 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Smarcc2Q6PDG5 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcc2Q6PDG5 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcc2Q6PDG5 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms