Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
SspnQ62147 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SspnQ62147 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.88□□□□□ -0.51
SspnQ62147 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SspnQ62147 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SspnQ62147 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SspnQ62147 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SspnQ62147 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
SspnQ62147 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SspnQ62147 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SspnQ62147 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
SspnQ62147 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SspnQ62147 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SspnQ62147 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SspnQ62147 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SspnQ62147 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SspnQ62147 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.88□□□□□ -0.51
SspnQ62147 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SspnQ62147 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SspnQ62147 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.88□□□□□ -0.51
SspnQ62147 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SspnQ62147 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SspnQ62147 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SspnQ62147 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SspnQ62147 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
SspnQ62147 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SspnQ62147 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SspnQ62147 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SspnQ62147 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SspnQ62147 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SspnQ62147 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SspnQ62147 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SspnQ62147 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SspnQ62147 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
SspnQ62147 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SspnQ62147 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SspnQ62147 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
SspnQ62147 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SspnQ62147 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SspnQ62147 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
SspnQ62147 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
SspnQ62147 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC11.87□□□□□ -0.51
SspnQ62147 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.87□□□□□ -0.51
SspnQ62147 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.87□□□□□ -0.51
SspnQ62147 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC11.87□□□□□ -0.51
SspnQ62147 Mir3113-201ENSMUST00000175478 76 ntBASIC11.87□□□□□ -0.51
SspnQ62147 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SspnQ62147 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SspnQ62147 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC11.87□□□□□ -0.51
SspnQ62147 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SspnQ62147 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SspnQ62147 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
SspnQ62147 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SspnQ62147 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
SspnQ62147 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SspnQ62147 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
SspnQ62147 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SspnQ62147 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
SspnQ62147 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
SspnQ62147 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.87□□□□□ -0.51
SspnQ62147 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.87□□□□□ -0.51
SspnQ62147 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SspnQ62147 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SspnQ62147 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.86□□□□□ -0.51
SspnQ62147 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
SspnQ62147 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SspnQ62147 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
SspnQ62147 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SspnQ62147 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SspnQ62147 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
SspnQ62147 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
SspnQ62147 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SspnQ62147 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SspnQ62147 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SspnQ62147 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SspnQ62147 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SspnQ62147 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SspnQ62147 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SspnQ62147 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
SspnQ62147 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SspnQ62147 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SspnQ62147 Gm12892-201ENSMUST00000117367 1146 ntBASIC11.86□□□□□ -0.51
SspnQ62147 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.86□□□□□ -0.51
SspnQ62147 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SspnQ62147 Gm5479-201ENSMUST00000160578 435 ntBASIC11.86□□□□□ -0.51
SspnQ62147 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
SspnQ62147 Mir8117-201ENSMUST00000184773 107 ntBASIC11.86□□□□□ -0.51
SspnQ62147 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC11.86□□□□□ -0.51
SspnQ62147 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC11.86□□□□□ -0.51
SspnQ62147 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SspnQ62147 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SspnQ62147 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SspnQ62147 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SspnQ62147 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SspnQ62147 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.86□□□□□ -0.51
SspnQ62147 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
SspnQ62147 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SspnQ62147 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
SspnQ62147 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SspnQ62147 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms