Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gli3Q61602 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gli3Q61602 CU062626.3-201ENSMUST00000225522 1411 ntBASIC18.67■□□□□ 0.58
Gli3Q61602 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gli3Q61602 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gli3Q61602 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gli3Q61602 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gli3Q61602 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Gli3Q61602 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gli3Q61602 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gli3Q61602 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gli3Q61602 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Gli3Q61602 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC18.66■□□□□ 0.58
Gli3Q61602 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gli3Q61602 Gm9540-201ENSMUST00000188230 478 ntBASIC18.66■□□□□ 0.58
Gli3Q61602 CT025694.1-201ENSMUST00000226188 934 ntBASIC18.66■□□□□ 0.58
Gli3Q61602 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gli3Q61602 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gli3Q61602 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gli3Q61602 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Gli3Q61602 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gli3Q61602 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Gli3Q61602 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gli3Q61602 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Gli3Q61602 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gli3Q61602 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gli3Q61602 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Gli3Q61602 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gli3Q61602 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gli3Q61602 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gli3Q61602 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Gli3Q61602 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gli3Q61602 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Gli3Q61602 Gm13886-201ENSMUST00000117876 1183 ntBASIC18.65■□□□□ 0.58
Gli3Q61602 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gli3Q61602 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gli3Q61602 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gli3Q61602 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gli3Q61602 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Gli3Q61602 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gli3Q61602 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gli3Q61602 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gli3Q61602 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
Gli3Q61602 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gli3Q61602 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gli3Q61602 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Gli3Q61602 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Gli3Q61602 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.64■□□□□ 0.58
Gli3Q61602 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC18.64■□□□□ 0.58
Gli3Q61602 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Gli3Q61602 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Gli3Q61602 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Gli3Q61602 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.58
Gli3Q61602 Gm26956-201ENSMUST00000182176 986 ntBASIC18.64■□□□□ 0.58
Gli3Q61602 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
Gli3Q61602 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Gli3Q61602 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gli3Q61602 AC167669.2-201ENSMUST00000224417 1620 ntBASIC18.64■□□□□ 0.57
Gli3Q61602 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Gli3Q61602 Gm44775-201ENSMUST00000207266 1456 ntBASIC18.64■□□□□ 0.57
Gli3Q61602 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Gli3Q61602 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gli3Q61602 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gli3Q61602 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gli3Q61602 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gli3Q61602 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gli3Q61602 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.64■□□□□ 0.57
Gli3Q61602 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gli3Q61602 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gli3Q61602 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Gli3Q61602 Gm11531-201ENSMUST00000117614 555 ntBASIC18.64■□□□□ 0.57
Gli3Q61602 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Gli3Q61602 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC18.64■□□□□ 0.57
Gli3Q61602 Gm25700-201ENSMUST00000177693 110 ntBASIC18.64■□□□□ 0.57
Gli3Q61602 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC18.64■□□□□ 0.57
Gli3Q61602 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gli3Q61602 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gli3Q61602 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gli3Q61602 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gli3Q61602 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gli3Q61602 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gli3Q61602 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gli3Q61602 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gli3Q61602 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gli3Q61602 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gli3Q61602 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gli3Q61602 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gli3Q61602 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gli3Q61602 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gli3Q61602 Gm23699-201ENSMUST00000158835 135 ntBASIC18.63■□□□□ 0.57
Gli3Q61602 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gli3Q61602 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC18.63■□□□□ 0.57
Gli3Q61602 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC18.63■□□□□ 0.57
Gli3Q61602 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC18.63■□□□□ 0.57
Gli3Q61602 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Gli3Q61602 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gli3Q61602 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Gli3Q61602 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.63■□□□□ 0.57
Gli3Q61602 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gli3Q61602 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms