Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Col11a1Q61245 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.53■□□□□ 0.08
Col11a1Q61245 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col11a1Q61245 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col11a1Q61245 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Col11a1Q61245 Gm11591-201ENSMUST00000120063 702 ntBASIC15.53■□□□□ 0.08
Col11a1Q61245 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC15.53■□□□□ 0.08
Col11a1Q61245 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col11a1Q61245 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Col11a1Q61245 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col11a1Q61245 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col11a1Q61245 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col11a1Q61245 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col11a1Q61245 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col11a1Q61245 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col11a1Q61245 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col11a1Q61245 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col11a1Q61245 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col11a1Q61245 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col11a1Q61245 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col11a1Q61245 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col11a1Q61245 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col11a1Q61245 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC15.52■□□□□ 0.08
Col11a1Q61245 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC15.52■□□□□ 0.08
Col11a1Q61245 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC15.52■□□□□ 0.08
Col11a1Q61245 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col11a1Q61245 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col11a1Q61245 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col11a1Q61245 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.52■□□□□ 0.08
Col11a1Q61245 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.52■□□□□ 0.08
Col11a1Q61245 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col11a1Q61245 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.52■□□□□ 0.08
Col11a1Q61245 Gm20632-201ENSMUST00000176760 2427 ntBASIC15.52■□□□□ 0.07
Col11a1Q61245 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Col11a1Q61245 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col11a1Q61245 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC15.52■□□□□ 0.07
Col11a1Q61245 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Col11a1Q61245 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col11a1Q61245 Mir5132-201ENSMUST00000175166 71 ntBASIC15.52■□□□□ 0.07
Col11a1Q61245 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Col11a1Q61245 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC15.52■□□□□ 0.07
Col11a1Q61245 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC15.52■□□□□ 0.07
Col11a1Q61245 Gm43138-201ENSMUST00000199123 708 ntBASIC15.52■□□□□ 0.07
Col11a1Q61245 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
Col11a1Q61245 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC15.52■□□□□ 0.07
Col11a1Q61245 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col11a1Q61245 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col11a1Q61245 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Col11a1Q61245 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col11a1Q61245 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col11a1Q61245 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col11a1Q61245 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.52■□□□□ 0.07
Col11a1Q61245 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col11a1Q61245 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Col11a1Q61245 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col11a1Q61245 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC15.51■□□□□ 0.07
Col11a1Q61245 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC15.51■□□□□ 0.07
Col11a1Q61245 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col11a1Q61245 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col11a1Q61245 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Col11a1Q61245 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col11a1Q61245 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col11a1Q61245 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a1Q61245 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a1Q61245 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a1Q61245 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Col11a1Q61245 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a1Q61245 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a1Q61245 Gm16202-201ENSMUST00000117532 544 ntBASIC15.5■□□□□ 0.07
Col11a1Q61245 Gm11439-201ENSMUST00000118598 409 ntBASIC15.5■□□□□ 0.07
Col11a1Q61245 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Col11a1Q61245 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Col11a1Q61245 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Col11a1Q61245 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a1Q61245 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a1Q61245 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a1Q61245 Gm43579-201ENSMUST00000202387 1307 ntBASIC15.5■□□□□ 0.07
Col11a1Q61245 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a1Q61245 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.5■□□□□ 0.07
Col11a1Q61245 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a1Q61245 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.5■□□□□ 0.07
Col11a1Q61245 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Col11a1Q61245 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a1Q61245 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a1Q61245 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a1Q61245 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a1Q61245 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC15.5■□□□□ 0.07
Col11a1Q61245 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
Col11a1Q61245 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.5■□□□□ 0.07
Col11a1Q61245 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a1Q61245 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC15.5■□□□□ 0.07
Col11a1Q61245 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a1Q61245 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC15.5■□□□□ 0.07
Col11a1Q61245 Gm2606-201ENSMUST00000100754 1002 ntBASIC15.5■□□□□ 0.07
Col11a1Q61245 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC15.5■□□□□ 0.07
Col11a1Q61245 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC15.5■□□□□ 0.07
Col11a1Q61245 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC15.5■□□□□ 0.07
Col11a1Q61245 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a1Q61245 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC15.5■□□□□ 0.07
Col11a1Q61245 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms