Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm26110-201ENSMUST00000083971 165 ntBASIC13.7□□□□□ -0.22
Col12a1Q60847 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.7□□□□□ -0.22
Col12a1Q60847 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col12a1Q60847 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col12a1Q60847 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col12a1Q60847 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col12a1Q60847 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col12a1Q60847 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.69□□□□□ -0.22
Col12a1Q60847 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col12a1Q60847 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col12a1Q60847 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col12a1Q60847 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.69□□□□□ -0.22
Col12a1Q60847 Gm6407-201ENSMUST00000176468 549 ntBASIC13.69□□□□□ -0.22
Col12a1Q60847 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col12a1Q60847 Gm10109-202ENSMUST00000206890 1211 ntBASIC13.69□□□□□ -0.22
Col12a1Q60847 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.69□□□□□ -0.22
Col12a1Q60847 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col12a1Q60847 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col12a1Q60847 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col12a1Q60847 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col12a1Q60847 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col12a1Q60847 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col12a1Q60847 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col12a1Q60847 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col12a1Q60847 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col12a1Q60847 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col12a1Q60847 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col12a1Q60847 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Col12a1Q60847 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col12a1Q60847 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Col12a1Q60847 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col12a1Q60847 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col12a1Q60847 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Col12a1Q60847 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col12a1Q60847 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.68□□□□□ -0.22
Col12a1Q60847 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col12a1Q60847 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.68□□□□□ -0.22
Col12a1Q60847 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col12a1Q60847 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Col12a1Q60847 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col12a1Q60847 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Col12a1Q60847 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col12a1Q60847 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col12a1Q60847 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col12a1Q60847 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col12a1Q60847 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.68□□□□□ -0.22
Col12a1Q60847 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col12a1Q60847 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col12a1Q60847 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col12a1Q60847 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Col12a1Q60847 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.68□□□□□ -0.22
Col12a1Q60847 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.68□□□□□ -0.22
Col12a1Q60847 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.68□□□□□ -0.22
Col12a1Q60847 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col12a1Q60847 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col12a1Q60847 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col12a1Q60847 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col12a1Q60847 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col12a1Q60847 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col12a1Q60847 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col12a1Q60847 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col12a1Q60847 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col12a1Q60847 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col12a1Q60847 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col12a1Q60847 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col12a1Q60847 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col12a1Q60847 Gm44100-201ENSMUST00000204329 436 ntBASIC13.68□□□□□ -0.22
Col12a1Q60847 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col12a1Q60847 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col12a1Q60847 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col12a1Q60847 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col12a1Q60847 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col12a1Q60847 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col12a1Q60847 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col12a1Q60847 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC13.67□□□□□ -0.22
Col12a1Q60847 Gm44545-201ENSMUST00000208262 746 ntBASIC13.67□□□□□ -0.22
Col12a1Q60847 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col12a1Q60847 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col12a1Q60847 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col12a1Q60847 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Col12a1Q60847 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col12a1Q60847 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col12a1Q60847 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col12a1Q60847 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.67□□□□□ -0.22
Col12a1Q60847 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col12a1Q60847 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.67□□□□□ -0.22
Col12a1Q60847 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col12a1Q60847 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col12a1Q60847 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col12a1Q60847 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col12a1Q60847 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col12a1Q60847 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col12a1Q60847 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col12a1Q60847 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.66□□□□□ -0.22
Col12a1Q60847 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.66□□□□□ -0.22
Col12a1Q60847 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.66□□□□□ -0.22
Col12a1Q60847 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.66□□□□□ -0.22
Col12a1Q60847 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Col12a1Q60847 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col12a1Q60847 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms