Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.81□□□□□ -0.52
Znf48Q3US17 Gm13223-201ENSMUST00000118609 747 ntBASIC11.81□□□□□ -0.52
Znf48Q3US17 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC11.81□□□□□ -0.52
Znf48Q3US17 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Znf48Q3US17 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC11.81□□□□□ -0.52
Znf48Q3US17 Gm17837-201ENSMUST00000186435 985 ntBASIC11.81□□□□□ -0.52
Znf48Q3US17 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC11.81□□□□□ -0.52
Znf48Q3US17 CT025555.1-201ENSMUST00000225901 1217 ntBASIC11.81□□□□□ -0.52
Znf48Q3US17 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Znf48Q3US17 Prkcz2-201ENSMUST00000206136 1756 ntBASIC11.81□□□□□ -0.52
Znf48Q3US17 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Znf48Q3US17 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Znf48Q3US17 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Znf48Q3US17 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Znf48Q3US17 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Znf48Q3US17 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Znf48Q3US17 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.81□□□□□ -0.52
Znf48Q3US17 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Znf48Q3US17 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Znf48Q3US17 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Znf48Q3US17 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Znf48Q3US17 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Znf48Q3US17 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Znf48Q3US17 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Znf48Q3US17 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
Znf48Q3US17 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Znf48Q3US17 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Znf48Q3US17 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.8□□□□□ -0.52
Znf48Q3US17 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Znf48Q3US17 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Znf48Q3US17 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Znf48Q3US17 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Znf48Q3US17 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Znf48Q3US17 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Znf48Q3US17 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Znf48Q3US17 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Znf48Q3US17 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Znf48Q3US17 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Znf48Q3US17 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Znf48Q3US17 Gm35638-201ENSMUST00000220724 652 ntBASIC11.8□□□□□ -0.52
Znf48Q3US17 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Znf48Q3US17 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Znf48Q3US17 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Znf48Q3US17 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Znf48Q3US17 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Znf48Q3US17 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Znf48Q3US17 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Znf48Q3US17 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Znf48Q3US17 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Znf48Q3US17 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Znf48Q3US17 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Znf48Q3US17 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Znf48Q3US17 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Znf48Q3US17 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Znf48Q3US17 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.8□□□□□ -0.52
Znf48Q3US17 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Znf48Q3US17 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC11.79□□□□□ -0.52
Znf48Q3US17 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Znf48Q3US17 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Znf48Q3US17 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Znf48Q3US17 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Znf48Q3US17 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Znf48Q3US17 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Znf48Q3US17 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Znf48Q3US17 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Znf48Q3US17 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Znf48Q3US17 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Znf48Q3US17 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.79□□□□□ -0.52
Znf48Q3US17 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Znf48Q3US17 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Znf48Q3US17 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Znf48Q3US17 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Znf48Q3US17 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Znf48Q3US17 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.79□□□□□ -0.52
Znf48Q3US17 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Znf48Q3US17 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Znf48Q3US17 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC11.79□□□□□ -0.52
Znf48Q3US17 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Znf48Q3US17 Gm27618-201ENSMUST00000183671 60 ntBASIC11.79□□□□□ -0.52
Znf48Q3US17 Mir8102-201ENSMUST00000184148 139 ntBASIC11.79□□□□□ -0.52
Znf48Q3US17 Gm27989-201ENSMUST00000184721 107 ntBASIC11.79□□□□□ -0.52
Znf48Q3US17 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Znf48Q3US17 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.79□□□□□ -0.52
Znf48Q3US17 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Znf48Q3US17 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Znf48Q3US17 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.79□□□□□ -0.52
Znf48Q3US17 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Znf48Q3US17 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Znf48Q3US17 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Znf48Q3US17 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Znf48Q3US17 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Znf48Q3US17 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Znf48Q3US17 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Znf48Q3US17 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Znf48Q3US17 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Znf48Q3US17 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Znf48Q3US17 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Znf48Q3US17 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Znf48Q3US17 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Znf48Q3US17 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms