Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 Gm14451-201ENSMUST00000121581 1542 ntBASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 AC121801.1-201ENSMUST00000225363 1899 ntBASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Gm18284-201ENSMUST00000172604 624 ntBASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Mir1668-201ENSMUST00000184114 107 ntBASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1brtQ3UNC9 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1brtQ3UNC9 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1brtQ3UNC9 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.15□□□□□ -0.78
Cks1brtQ3UNC9 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1brtQ3UNC9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1brtQ3UNC9 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1brtQ3UNC9 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC10.15□□□□□ -0.78
Cks1brtQ3UNC9 AC117194.1-201ENSMUST00000224847 3002 ntBASIC10.15□□□□□ -0.78
Cks1brtQ3UNC9 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
Cks1brtQ3UNC9 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1brtQ3UNC9 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1brtQ3UNC9 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Cks1brtQ3UNC9 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Cks1brtQ3UNC9 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1brtQ3UNC9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1brtQ3UNC9 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1brtQ3UNC9 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1brtQ3UNC9 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.15□□□□□ -0.78
Cks1brtQ3UNC9 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1brtQ3UNC9 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1brtQ3UNC9 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1brtQ3UNC9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC10.15□□□□□ -0.78
Cks1brtQ3UNC9 Gm1818-201ENSMUST00000169406 1184 ntBASIC10.15□□□□□ -0.78
Cks1brtQ3UNC9 Gm37722-201ENSMUST00000193757 208 ntBASIC10.15□□□□□ -0.78
Cks1brtQ3UNC9 AC135963.1-201ENSMUST00000211640 717 ntBASIC10.15□□□□□ -0.78
Cks1brtQ3UNC9 AC135637.1-201ENSMUST00000227750 365 ntBASIC10.15□□□□□ -0.78
Cks1brtQ3UNC9 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1brtQ3UNC9 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Cks1brtQ3UNC9 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC10.15□□□□□ -0.78
Cks1brtQ3UNC9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1brtQ3UNC9 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1brtQ3UNC9 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1brtQ3UNC9 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1brtQ3UNC9 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC10.15□□□□□ -0.78
Cks1brtQ3UNC9 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms