Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccbe1Q3MI99 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.82□□□□□ -0.36
Ccbe1Q3MI99 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12.82□□□□□ -0.36
Ccbe1Q3MI99 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccbe1Q3MI99 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ccbe1Q3MI99 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccbe1Q3MI99 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccbe1Q3MI99 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccbe1Q3MI99 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.82□□□□□ -0.36
Ccbe1Q3MI99 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccbe1Q3MI99 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccbe1Q3MI99 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.82□□□□□ -0.36
Ccbe1Q3MI99 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccbe1Q3MI99 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccbe1Q3MI99 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ccbe1Q3MI99 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccbe1Q3MI99 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccbe1Q3MI99 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccbe1Q3MI99 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccbe1Q3MI99 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccbe1Q3MI99 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccbe1Q3MI99 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
Ccbe1Q3MI99 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ccbe1Q3MI99 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccbe1Q3MI99 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.81□□□□□ -0.36
Ccbe1Q3MI99 Gm18669-201ENSMUST00000216049 778 ntBASIC12.81□□□□□ -0.36
Ccbe1Q3MI99 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccbe1Q3MI99 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.81□□□□□ -0.36
Ccbe1Q3MI99 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccbe1Q3MI99 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccbe1Q3MI99 Paupar-201ENSMUST00000194826 3482 ntBASIC12.81□□□□□ -0.36
Ccbe1Q3MI99 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccbe1Q3MI99 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccbe1Q3MI99 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ccbe1Q3MI99 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccbe1Q3MI99 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ccbe1Q3MI99 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccbe1Q3MI99 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.81□□□□□ -0.36
Ccbe1Q3MI99 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccbe1Q3MI99 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ccbe1Q3MI99 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccbe1Q3MI99 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccbe1Q3MI99 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccbe1Q3MI99 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccbe1Q3MI99 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccbe1Q3MI99 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccbe1Q3MI99 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Ccbe1Q3MI99 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccbe1Q3MI99 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccbe1Q3MI99 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccbe1Q3MI99 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccbe1Q3MI99 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccbe1Q3MI99 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccbe1Q3MI99 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccbe1Q3MI99 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ccbe1Q3MI99 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccbe1Q3MI99 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.8□□□□□ -0.36
Ccbe1Q3MI99 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.8□□□□□ -0.36
Ccbe1Q3MI99 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccbe1Q3MI99 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccbe1Q3MI99 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccbe1Q3MI99 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccbe1Q3MI99 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ccbe1Q3MI99 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccbe1Q3MI99 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ccbe1Q3MI99 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccbe1Q3MI99 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccbe1Q3MI99 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccbe1Q3MI99 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ccbe1Q3MI99 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccbe1Q3MI99 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccbe1Q3MI99 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccbe1Q3MI99 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 Gm7153-201ENSMUST00000117092 455 ntBASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms