Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3aP84244 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3aP84244 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.62□□□□□ -0.39
H3f3aP84244 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3aP84244 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3aP84244 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
H3f3aP84244 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3aP84244 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3aP84244 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3aP84244 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3aP84244 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3aP84244 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3aP84244 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3aP84244 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
H3f3aP84244 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3aP84244 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.61□□□□□ -0.39
H3f3aP84244 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3aP84244 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3aP84244 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3aP84244 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.61□□□□□ -0.39
H3f3aP84244 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3aP84244 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.61□□□□□ -0.39
H3f3aP84244 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
H3f3aP84244 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3aP84244 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3aP84244 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.61□□□□□ -0.39
H3f3aP84244 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
H3f3aP84244 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3aP84244 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3aP84244 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.61□□□□□ -0.39
H3f3aP84244 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3aP84244 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3aP84244 Gm13223-201ENSMUST00000118609 747 ntBASIC12.61□□□□□ -0.39
H3f3aP84244 Gm13453-201ENSMUST00000118708 357 ntBASIC12.61□□□□□ -0.39
H3f3aP84244 Mir1897-201ENSMUST00000122581 272 ntBASIC12.61□□□□□ -0.39
H3f3aP84244 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3aP84244 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3aP84244 Gm27680-201ENSMUST00000184192 160 ntBASIC12.61□□□□□ -0.39
H3f3aP84244 Gm38294-201ENSMUST00000192831 381 ntBASIC12.61□□□□□ -0.39
H3f3aP84244 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.61□□□□□ -0.39
H3f3aP84244 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.61□□□□□ -0.39
H3f3aP84244 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.61□□□□□ -0.39
H3f3aP84244 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3aP84244 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3aP84244 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3aP84244 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3aP84244 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3aP84244 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
H3f3aP84244 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
H3f3aP84244 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3aP84244 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3aP84244 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3aP84244 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
H3f3aP84244 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
H3f3aP84244 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3aP84244 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3aP84244 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
H3f3aP84244 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3aP84244 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
H3f3aP84244 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3aP84244 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3aP84244 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3aP84244 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H3f3aP84244 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H3f3aP84244 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H3f3aP84244 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H3f3aP84244 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
H3f3aP84244 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
H3f3aP84244 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H3f3aP84244 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
H3f3aP84244 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
H3f3aP84244 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H3f3aP84244 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
H3f3aP84244 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
H3f3aP84244 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.6□□□□□ -0.39
H3f3aP84244 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
H3f3aP84244 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.6□□□□□ -0.39
H3f3aP84244 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.6□□□□□ -0.39
H3f3aP84244 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.6□□□□□ -0.39
H3f3aP84244 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
H3f3aP84244 Gm27306-201ENSMUST00000183970 107 ntBASIC12.6□□□□□ -0.39
H3f3aP84244 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
H3f3aP84244 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.6□□□□□ -0.39
H3f3aP84244 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H3f3aP84244 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H3f3aP84244 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.6□□□□□ -0.39
H3f3aP84244 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H3f3aP84244 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H3f3aP84244 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
H3f3aP84244 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
H3f3aP84244 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.6□□□□□ -0.39
H3f3aP84244 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
H3f3aP84244 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
H3f3aP84244 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
H3f3aP84244 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
H3f3aP84244 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H3f3aP84244 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H3f3aP84244 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
H3f3aP84244 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.59□□□□□ -0.39
H3f3aP84244 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms