Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.03□□□□□ -0.16
Crnkl1P63154 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.03□□□□□ -0.16
Crnkl1P63154 Gm6550-201ENSMUST00000187574 993 ntBASIC14.03□□□□□ -0.16
Crnkl1P63154 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.03□□□□□ -0.16
Crnkl1P63154 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.03□□□□□ -0.16
Crnkl1P63154 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.03□□□□□ -0.16
Crnkl1P63154 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.03□□□□□ -0.16
Crnkl1P63154 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crnkl1P63154 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Crnkl1P63154 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.03□□□□□ -0.16
Crnkl1P63154 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.03□□□□□ -0.16
Crnkl1P63154 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.03□□□□□ -0.16
Crnkl1P63154 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crnkl1P63154 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crnkl1P63154 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crnkl1P63154 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Crnkl1P63154 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Crnkl1P63154 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Crnkl1P63154 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crnkl1P63154 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Crnkl1P63154 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crnkl1P63154 Grk6-207ENSMUST00000225925 2769 ntBASIC14.03□□□□□ -0.16
Crnkl1P63154 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crnkl1P63154 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Crnkl1P63154 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Crnkl1P63154 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crnkl1P63154 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Crnkl1P63154 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Crnkl1P63154 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crnkl1P63154 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Crnkl1P63154 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Crnkl1P63154 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Crnkl1P63154 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Crnkl1P63154 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Crnkl1P63154 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Crnkl1P63154 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Crnkl1P63154 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Crnkl1P63154 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.02□□□□□ -0.16
Crnkl1P63154 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Crnkl1P63154 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Crnkl1P63154 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Crnkl1P63154 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Crnkl1P63154 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Crnkl1P63154 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Crnkl1P63154 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Crnkl1P63154 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.02□□□□□ -0.16
Crnkl1P63154 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Crnkl1P63154 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Crnkl1P63154 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Crnkl1P63154 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Crnkl1P63154 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.02□□□□□ -0.17
Crnkl1P63154 Gm27646-201ENSMUST00000183989 110 ntBASIC14.02□□□□□ -0.17
Crnkl1P63154 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.02□□□□□ -0.17
Crnkl1P63154 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.02□□□□□ -0.17
Crnkl1P63154 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Crnkl1P63154 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Crnkl1P63154 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Crnkl1P63154 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Crnkl1P63154 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Crnkl1P63154 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Crnkl1P63154 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.02□□□□□ -0.17
Crnkl1P63154 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Crnkl1P63154 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Crnkl1P63154 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crnkl1P63154 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crnkl1P63154 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Crnkl1P63154 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crnkl1P63154 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Crnkl1P63154 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crnkl1P63154 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crnkl1P63154 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crnkl1P63154 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.01□□□□□ -0.17
Crnkl1P63154 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.01□□□□□ -0.17
Crnkl1P63154 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Crnkl1P63154 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Crnkl1P63154 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Crnkl1P63154 Gm15358-201ENSMUST00000119249 520 ntBASIC14.01□□□□□ -0.17
Crnkl1P63154 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Crnkl1P63154 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.01□□□□□ -0.17
Crnkl1P63154 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crnkl1P63154 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crnkl1P63154 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Crnkl1P63154 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.01□□□□□ -0.17
Crnkl1P63154 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Crnkl1P63154 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
Crnkl1P63154 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.01□□□□□ -0.17
Crnkl1P63154 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crnkl1P63154 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crnkl1P63154 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.01□□□□□ -0.17
Crnkl1P63154 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crnkl1P63154 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crnkl1P63154 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Crnkl1P63154 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crnkl1P63154 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crnkl1P63154 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crnkl1P63154 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Crnkl1P63154 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.01□□□□□ -0.17
Crnkl1P63154 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Crnkl1P63154 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crnkl1P63154 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms