Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.06□□□□□ -0.16
Atxn1P54254 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atxn1P54254 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Atxn1P54254 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
Atxn1P54254 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.06□□□□□ -0.16
Atxn1P54254 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Atxn1P54254 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Atxn1P54254 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atxn1P54254 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Atxn1P54254 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atxn1P54254 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atxn1P54254 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atxn1P54254 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.05□□□□□ -0.16
Atxn1P54254 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atxn1P54254 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Atxn1P54254 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Atxn1P54254 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atxn1P54254 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atxn1P54254 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atxn1P54254 Gm12341-201ENSMUST00000119724 503 ntBASIC14.05□□□□□ -0.16
Atxn1P54254 Snora78-201ENSMUST00000158630 128 ntBASIC14.05□□□□□ -0.16
Atxn1P54254 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Atxn1P54254 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.05□□□□□ -0.16
Atxn1P54254 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.05□□□□□ -0.16
Atxn1P54254 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.05□□□□□ -0.16
Atxn1P54254 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atxn1P54254 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atxn1P54254 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atxn1P54254 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atxn1P54254 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atxn1P54254 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atxn1P54254 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Atxn1P54254 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Atxn1P54254 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Atxn1P54254 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Atxn1P54254 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Atxn1P54254 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atxn1P54254 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atxn1P54254 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Atxn1P54254 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atxn1P54254 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.05□□□□□ -0.16
Atxn1P54254 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atxn1P54254 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Atxn1P54254 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atxn1P54254 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atxn1P54254 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atxn1P54254 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Atxn1P54254 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atxn1P54254 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atxn1P54254 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.04□□□□□ -0.16
Atxn1P54254 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.04□□□□□ -0.16
Atxn1P54254 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.04□□□□□ -0.16
Atxn1P54254 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.04□□□□□ -0.16
Atxn1P54254 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.04□□□□□ -0.16
Atxn1P54254 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.04□□□□□ -0.16
Atxn1P54254 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.04□□□□□ -0.16
Atxn1P54254 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atxn1P54254 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atxn1P54254 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atxn1P54254 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atxn1P54254 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atxn1P54254 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atxn1P54254 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atxn1P54254 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atxn1P54254 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Atxn1P54254 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atxn1P54254 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.04□□□□□ -0.16
Atxn1P54254 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.04□□□□□ -0.16
Atxn1P54254 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Atxn1P54254 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atxn1P54254 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Atxn1P54254 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atxn1P54254 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atxn1P54254 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atxn1P54254 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Atxn1P54254 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atxn1P54254 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atxn1P54254 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atxn1P54254 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atxn1P54254 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atxn1P54254 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.03□□□□□ -0.16
Atxn1P54254 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Atxn1P54254 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Atxn1P54254 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atxn1P54254 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atxn1P54254 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.03□□□□□ -0.16
Atxn1P54254 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atxn1P54254 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.03□□□□□ -0.16
Atxn1P54254 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atxn1P54254 Gm6244-201ENSMUST00000178732 841 ntBASIC14.03□□□□□ -0.16
Atxn1P54254 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.03□□□□□ -0.16
Atxn1P54254 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.03□□□□□ -0.16
Atxn1P54254 Gm45784-201ENSMUST00000188360 142 ntBASIC14.03□□□□□ -0.16
Atxn1P54254 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Atxn1P54254 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.03□□□□□ -0.16
Atxn1P54254 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.03□□□□□ -0.16
Atxn1P54254 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Atxn1P54254 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.03□□□□□ -0.16
Atxn1P54254 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atxn1P54254 Gm45453-201ENSMUST00000211758 853 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms