Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-1P50220 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.75□□□□□ -0.53
Nkx2-1P50220 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-1P50220 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-1P50220 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-1P50220 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-1P50220 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-1P50220 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-1P50220 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Nkx2-1P50220 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.74□□□□□ -0.53
Nkx2-1P50220 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.74□□□□□ -0.53
Nkx2-1P50220 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC11.74□□□□□ -0.53
Nkx2-1P50220 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC11.74□□□□□ -0.53
Nkx2-1P50220 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC11.74□□□□□ -0.53
Nkx2-1P50220 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-1P50220 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.74□□□□□ -0.53
Nkx2-1P50220 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-1P50220 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Nkx2-1P50220 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-1P50220 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.73□□□□□ -0.53
Nkx2-1P50220 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-1P50220 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Nkx2-1P50220 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.73□□□□□ -0.53
Nkx2-1P50220 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-1P50220 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC11.73□□□□□ -0.53
Nkx2-1P50220 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Nkx2-1P50220 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
Nkx2-1P50220 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-1P50220 Gm9252-201ENSMUST00000172364 1602 ntBASIC11.73□□□□□ -0.53
Nkx2-1P50220 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-1P50220 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Nkx2-1P50220 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-1P50220 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC11.73□□□□□ -0.53
Nkx2-1P50220 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Nkx2-1P50220 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.73□□□□□ -0.53
Nkx2-1P50220 Olfr286-202ENSMUST00000205305 969 ntBASIC11.73□□□□□ -0.53
Nkx2-1P50220 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.73□□□□□ -0.53
Nkx2-1P50220 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-1P50220 AC131743.5-201ENSMUST00000220775 1618 ntBASIC11.73□□□□□ -0.53
Nkx2-1P50220 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-1P50220 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Nkx2-1P50220 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-1P50220 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-1P50220 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-1P50220 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Nkx2-1P50220 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-1P50220 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-1P50220 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Nkx2-1P50220 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-1P50220 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-1P50220 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-1P50220 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-1P50220 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC11.72□□□□□ -0.53
Nkx2-1P50220 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Nkx2-1P50220 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-1P50220 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.72□□□□□ -0.53
Nkx2-1P50220 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms