Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-6P43688 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-6P43688 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-6P43688 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-6P43688 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Nkx2-6P43688 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Nkx2-6P43688 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Nkx2-6P43688 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-6P43688 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.4□□□□□ -0.26
Nkx2-6P43688 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.4□□□□□ -0.27
Nkx2-6P43688 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Nkx2-6P43688 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-6P43688 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-6P43688 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-6P43688 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.39□□□□□ -0.27
Nkx2-6P43688 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-6P43688 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-6P43688 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.39□□□□□ -0.27
Nkx2-6P43688 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-6P43688 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.39□□□□□ -0.27
Nkx2-6P43688 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.39□□□□□ -0.27
Nkx2-6P43688 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-6P43688 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-6P43688 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-6P43688 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-6P43688 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Nkx2-6P43688 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-6P43688 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.39□□□□□ -0.27
Nkx2-6P43688 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-6P43688 Gm15957-201ENSMUST00000118893 974 ntBASIC13.39□□□□□ -0.27
Nkx2-6P43688 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Nkx2-6P43688 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.39□□□□□ -0.27
Nkx2-6P43688 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-6P43688 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.39□□□□□ -0.27
Nkx2-6P43688 Gm18187-201ENSMUST00000196476 984 ntBASIC13.39□□□□□ -0.27
Nkx2-6P43688 Gm6745-201ENSMUST00000199216 526 ntBASIC13.39□□□□□ -0.27
Nkx2-6P43688 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.39□□□□□ -0.27
Nkx2-6P43688 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.39□□□□□ -0.27
Nkx2-6P43688 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-6P43688 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Nkx2-6P43688 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-6P43688 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-6P43688 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-6P43688 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-6P43688 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-6P43688 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.39□□□□□ -0.27
Nkx2-6P43688 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-6P43688 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-6P43688 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-6P43688 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Nkx2-6P43688 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-6P43688 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-6P43688 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.39□□□□□ -0.27
Nkx2-6P43688 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-6P43688 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.38□□□□□ -0.27
Nkx2-6P43688 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Gm18624-201ENSMUST00000220966 658 ntBASIC13.38□□□□□ -0.27
Nkx2-6P43688 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Nkx2-6P43688 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-6P43688 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-6P43688 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Nkx2-6P43688 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-6P43688 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.37□□□□□ -0.27
Nkx2-6P43688 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-6P43688 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms