Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HttP42859 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HttP42859 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.74□□□□□ -0.05
HttP42859 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HttP42859 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HttP42859 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
HttP42859 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HttP42859 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HttP42859 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HttP42859 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14.74□□□□□ -0.05
HttP42859 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HttP42859 Gm12363-201ENSMUST00000122250 668 ntBASIC14.74□□□□□ -0.05
HttP42859 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HttP42859 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.74□□□□□ -0.05
HttP42859 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HttP42859 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HttP42859 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC14.74□□□□□ -0.05
HttP42859 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HttP42859 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HttP42859 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
HttP42859 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.73□□□□□ -0.05
HttP42859 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
HttP42859 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HttP42859 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
HttP42859 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HttP42859 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HttP42859 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
HttP42859 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.73□□□□□ -0.05
HttP42859 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HttP42859 Gm25214-201ENSMUST00000104573 129 ntBASIC14.73□□□□□ -0.05
HttP42859 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
HttP42859 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.73□□□□□ -0.05
HttP42859 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC14.73□□□□□ -0.05
HttP42859 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HttP42859 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.73□□□□□ -0.05
HttP42859 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.73□□□□□ -0.05
HttP42859 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HttP42859 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HttP42859 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
HttP42859 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HttP42859 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HttP42859 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HttP42859 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HttP42859 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14.73□□□□□ -0.05
HttP42859 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
HttP42859 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HttP42859 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC14.72□□□□□ -0.05
HttP42859 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
HttP42859 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
HttP42859 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
HttP42859 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HttP42859 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC14.72□□□□□ -0.05
HttP42859 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HttP42859 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
HttP42859 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HttP42859 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
HttP42859 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.72□□□□□ -0.05
HttP42859 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HttP42859 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HttP42859 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
HttP42859 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
HttP42859 Gm9540-201ENSMUST00000188230 478 ntBASIC14.72□□□□□ -0.05
HttP42859 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC14.72□□□□□ -0.05
HttP42859 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HttP42859 Mir497b-201ENSMUST00000093601 125 ntBASIC14.72□□□□□ -0.05
HttP42859 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HttP42859 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
HttP42859 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HttP42859 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HttP42859 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HttP42859 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HttP42859 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HttP42859 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
HttP42859 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HttP42859 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HttP42859 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC14.72□□□□□ -0.05
HttP42859 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
HttP42859 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HttP42859 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC14.72□□□□□ -0.05
HttP42859 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
HttP42859 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
HttP42859 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
HttP42859 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HttP42859 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
HttP42859 Gm27438-201ENSMUST00000183480 110 ntBASIC14.71□□□□□ -0.05
HttP42859 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC14.71□□□□□ -0.05
HttP42859 Gm19208-201ENSMUST00000213861 912 ntBASIC14.71□□□□□ -0.05
HttP42859 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HttP42859 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HttP42859 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HttP42859 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.71□□□□□ -0.05
HttP42859 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HttP42859 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.71□□□□□ -0.05
HttP42859 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
HttP42859 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
HttP42859 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HttP42859 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC14.71□□□□□ -0.05
HttP42859 Gm45118-201ENSMUST00000208928 825 ntBASIC14.71□□□□□ -0.05
HttP42859 Gm30285-201ENSMUST00000214614 422 ntBASIC14.71□□□□□ -0.05
HttP42859 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms