Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.26□□□□□ -0.13
Fen1P39749 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fen1P39749 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fen1P39749 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Fen1P39749 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.26□□□□□ -0.13
Fen1P39749 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fen1P39749 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fen1P39749 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.26□□□□□ -0.13
Fen1P39749 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fen1P39749 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fen1P39749 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fen1P39749 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Fen1P39749 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.26□□□□□ -0.13
Fen1P39749 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fen1P39749 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Fen1P39749 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fen1P39749 Mir5131-201ENSMUST00000175426 93 ntBASIC14.26□□□□□ -0.13
Fen1P39749 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Fen1P39749 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Fen1P39749 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fen1P39749 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Fen1P39749 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Fen1P39749 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.26□□□□□ -0.13
Fen1P39749 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fen1P39749 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fen1P39749 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fen1P39749 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Fen1P39749 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fen1P39749 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Fen1P39749 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Fen1P39749 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fen1P39749 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fen1P39749 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.26□□□□□ -0.13
Fen1P39749 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fen1P39749 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fen1P39749 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fen1P39749 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fen1P39749 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fen1P39749 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Fen1P39749 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fen1P39749 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.26□□□□□ -0.13
Fen1P39749 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.26□□□□□ -0.13
Fen1P39749 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fen1P39749 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fen1P39749 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fen1P39749 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fen1P39749 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fen1P39749 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fen1P39749 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.25□□□□□ -0.13
Fen1P39749 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Fen1P39749 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fen1P39749 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fen1P39749 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fen1P39749 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.25□□□□□ -0.13
Fen1P39749 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fen1P39749 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.25□□□□□ -0.13
Fen1P39749 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Fen1P39749 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Fen1P39749 Gm11764-201ENSMUST00000120221 623 ntBASIC14.25□□□□□ -0.13
Fen1P39749 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fen1P39749 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.25□□□□□ -0.13
Fen1P39749 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fen1P39749 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fen1P39749 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fen1P39749 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Fen1P39749 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Fen1P39749 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fen1P39749 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fen1P39749 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fen1P39749 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fen1P39749 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Fen1P39749 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fen1P39749 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Fen1P39749 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.25□□□□□ -0.13
Fen1P39749 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Fen1P39749 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fen1P39749 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Fen1P39749 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
Fen1P39749 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Fen1P39749 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Fen1P39749 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fen1P39749 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Fen1P39749 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Fen1P39749 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fen1P39749 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fen1P39749 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fen1P39749 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Fen1P39749 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fen1P39749 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fen1P39749 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fen1P39749 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fen1P39749 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fen1P39749 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Fen1P39749 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Fen1P39749 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Fen1P39749 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fen1P39749 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Fen1P39749 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fen1P39749 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Fen1P39749 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms