Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxa1P35582 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.11□□□□□ -0.31
Foxa1P35582 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxa1P35582 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxa1P35582 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxa1P35582 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxa1P35582 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxa1P35582 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Foxa1P35582 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Foxa1P35582 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxa1P35582 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Foxa1P35582 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxa1P35582 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Foxa1P35582 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Foxa1P35582 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxa1P35582 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxa1P35582 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.1□□□□□ -0.31
Foxa1P35582 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxa1P35582 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxa1P35582 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Foxa1P35582 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Foxa1P35582 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.1□□□□□ -0.31
Foxa1P35582 Gm12428-201ENSMUST00000119844 727 ntBASIC13.1□□□□□ -0.31
Foxa1P35582 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Foxa1P35582 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Foxa1P35582 AA543401-201ENSMUST00000164248 1269 ntBASIC13.1□□□□□ -0.31
Foxa1P35582 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.1□□□□□ -0.31
Foxa1P35582 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.1□□□□□ -0.31
Foxa1P35582 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxa1P35582 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Foxa1P35582 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxa1P35582 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxa1P35582 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.1□□□□□ -0.31
Foxa1P35582 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxa1P35582 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxa1P35582 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxa1P35582 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxa1P35582 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxa1P35582 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Foxa1P35582 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxa1P35582 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Foxa1P35582 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Foxa1P35582 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxa1P35582 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxa1P35582 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxa1P35582 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Foxa1P35582 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.09□□□□□ -0.31
Foxa1P35582 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Foxa1P35582 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Foxa1P35582 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxa1P35582 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Foxa1P35582 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxa1P35582 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.09□□□□□ -0.31
Foxa1P35582 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxa1P35582 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxa1P35582 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxa1P35582 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Foxa1P35582 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Foxa1P35582 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxa1P35582 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxa1P35582 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.09□□□□□ -0.31
Foxa1P35582 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.09□□□□□ -0.31
Foxa1P35582 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Foxa1P35582 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxa1P35582 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxa1P35582 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxa1P35582 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxa1P35582 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxa1P35582 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxa1P35582 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Foxa1P35582 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxa1P35582 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxa1P35582 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Foxa1P35582 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.09□□□□□ -0.31
Foxa1P35582 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxa1P35582 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxa1P35582 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxa1P35582 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxa1P35582 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxa1P35582 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Foxa1P35582 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.09□□□□□ -0.31
Foxa1P35582 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Foxa1P35582 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxa1P35582 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Foxa1P35582 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Foxa1P35582 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Foxa1P35582 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Foxa1P35582 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.08□□□□□ -0.32
Foxa1P35582 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Foxa1P35582 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Foxa1P35582 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Foxa1P35582 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Foxa1P35582 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Foxa1P35582 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Foxa1P35582 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Foxa1P35582 Gm13223-201ENSMUST00000118609 747 ntBASIC13.08□□□□□ -0.32
Foxa1P35582 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Foxa1P35582 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.08□□□□□ -0.32
Foxa1P35582 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Foxa1P35582 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms