Protein–RNA interactions for Protein: P28867

Prkcd, Protein kinase C delta type, mousemouse

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcdP28867 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PrkcdP28867 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PrkcdP28867 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PrkcdP28867 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PrkcdP28867 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PrkcdP28867 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PrkcdP28867 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PrkcdP28867 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.04□□□□□ -0.16
PrkcdP28867 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.04□□□□□ -0.16
PrkcdP28867 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PrkcdP28867 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PrkcdP28867 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
PrkcdP28867 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PrkcdP28867 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PrkcdP28867 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
PrkcdP28867 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PrkcdP28867 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.04□□□□□ -0.16
PrkcdP28867 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.04□□□□□ -0.16
PrkcdP28867 Gm9103-201ENSMUST00000119371 405 ntBASIC14.04□□□□□ -0.16
PrkcdP28867 Gm15483-201ENSMUST00000120338 456 ntBASIC14.04□□□□□ -0.16
PrkcdP28867 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.04□□□□□ -0.16
PrkcdP28867 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PrkcdP28867 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.04□□□□□ -0.16
PrkcdP28867 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PrkcdP28867 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PrkcdP28867 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PrkcdP28867 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
PrkcdP28867 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
PrkcdP28867 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.04□□□□□ -0.16
PrkcdP28867 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PrkcdP28867 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PrkcdP28867 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PrkcdP28867 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrkcdP28867 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PrkcdP28867 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PrkcdP28867 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PrkcdP28867 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PrkcdP28867 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
PrkcdP28867 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrkcdP28867 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrkcdP28867 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PrkcdP28867 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrkcdP28867 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrkcdP28867 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrkcdP28867 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.03□□□□□ -0.16
PrkcdP28867 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.03□□□□□ -0.16
PrkcdP28867 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrkcdP28867 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.03□□□□□ -0.16
PrkcdP28867 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrkcdP28867 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.03□□□□□ -0.16
PrkcdP28867 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrkcdP28867 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.03□□□□□ -0.16
PrkcdP28867 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.03□□□□□ -0.16
PrkcdP28867 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrkcdP28867 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
PrkcdP28867 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PrkcdP28867 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrkcdP28867 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrkcdP28867 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PrkcdP28867 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrkcdP28867 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrkcdP28867 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PrkcdP28867 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrkcdP28867 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PrkcdP28867 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PrkcdP28867 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrkcdP28867 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PrkcdP28867 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrkcdP28867 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrkcdP28867 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrkcdP28867 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PrkcdP28867 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrkcdP28867 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PrkcdP28867 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
PrkcdP28867 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PrkcdP28867 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
PrkcdP28867 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PrkcdP28867 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.02□□□□□ -0.16
PrkcdP28867 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.02□□□□□ -0.16
PrkcdP28867 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PrkcdP28867 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PrkcdP28867 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.02□□□□□ -0.16
PrkcdP28867 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.02□□□□□ -0.16
PrkcdP28867 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
PrkcdP28867 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PrkcdP28867 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PrkcdP28867 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PrkcdP28867 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
PrkcdP28867 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PrkcdP28867 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.02□□□□□ -0.17
PrkcdP28867 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.02□□□□□ -0.17
PrkcdP28867 Mir5126-201ENSMUST00000175513 77 ntBASIC14.02□□□□□ -0.17
PrkcdP28867 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
PrkcdP28867 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PrkcdP28867 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.02□□□□□ -0.17
PrkcdP28867 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.02□□□□□ -0.17
PrkcdP28867 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PrkcdP28867 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PrkcdP28867 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PrkcdP28867 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms