Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col8a2P25318 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col8a2P25318 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col8a2P25318 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col8a2P25318 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col8a2P25318 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col8a2P25318 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col8a2P25318 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col8a2P25318 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col8a2P25318 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col8a2P25318 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col8a2P25318 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col8a2P25318 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Col8a2P25318 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col8a2P25318 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col8a2P25318 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.82□□□□□ -0.52
Col8a2P25318 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col8a2P25318 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col8a2P25318 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col8a2P25318 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col8a2P25318 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Col8a2P25318 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col8a2P25318 Gm15460-201ENSMUST00000118147 391 ntBASIC11.82□□□□□ -0.52
Col8a2P25318 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Col8a2P25318 Gm12882-201ENSMUST00000121696 517 ntBASIC11.82□□□□□ -0.52
Col8a2P25318 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Col8a2P25318 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col8a2P25318 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Col8a2P25318 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.82□□□□□ -0.52
Col8a2P25318 AA619741-201ENSMUST00000195095 646 ntBASIC11.82□□□□□ -0.52
Col8a2P25318 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.82□□□□□ -0.52
Col8a2P25318 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col8a2P25318 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.82□□□□□ -0.52
Col8a2P25318 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.82□□□□□ -0.52
Col8a2P25318 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col8a2P25318 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Col8a2P25318 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col8a2P25318 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.82□□□□□ -0.52
Col8a2P25318 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col8a2P25318 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col8a2P25318 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col8a2P25318 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col8a2P25318 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col8a2P25318 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col8a2P25318 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col8a2P25318 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col8a2P25318 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col8a2P25318 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Col8a2P25318 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col8a2P25318 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col8a2P25318 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.82□□□□□ -0.52
Col8a2P25318 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col8a2P25318 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col8a2P25318 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col8a2P25318 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.82□□□□□ -0.52
Col8a2P25318 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col8a2P25318 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col8a2P25318 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col8a2P25318 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col8a2P25318 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Col8a2P25318 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col8a2P25318 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col8a2P25318 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Col8a2P25318 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col8a2P25318 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col8a2P25318 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col8a2P25318 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.81□□□□□ -0.52
Col8a2P25318 Acot6-202ENSMUST00000222921 3622 ntBASIC11.81□□□□□ -0.52
Col8a2P25318 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col8a2P25318 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC11.81□□□□□ -0.52
Col8a2P25318 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Col8a2P25318 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col8a2P25318 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.81□□□□□ -0.52
Col8a2P25318 Gm15653-201ENSMUST00000119247 907 ntBASIC11.81□□□□□ -0.52
Col8a2P25318 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.81□□□□□ -0.52
Col8a2P25318 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col8a2P25318 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Col8a2P25318 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.81□□□□□ -0.52
Col8a2P25318 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Col8a2P25318 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.81□□□□□ -0.52
Col8a2P25318 Gm33320-201ENSMUST00000192232 530 ntBASIC11.81□□□□□ -0.52
Col8a2P25318 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.81□□□□□ -0.52
Col8a2P25318 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Col8a2P25318 Gm10766-202ENSMUST00000194123 606 ntBASIC11.81□□□□□ -0.52
Col8a2P25318 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col8a2P25318 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col8a2P25318 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.81□□□□□ -0.52
Col8a2P25318 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Col8a2P25318 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col8a2P25318 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.81□□□□□ -0.52
Col8a2P25318 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col8a2P25318 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col8a2P25318 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col8a2P25318 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col8a2P25318 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col8a2P25318 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Col8a2P25318 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.81□□□□□ -0.52
Col8a2P25318 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col8a2P25318 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col8a2P25318 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms