Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Fv4P11370 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Fv4P11370 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Fv4P11370 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Fv4P11370 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Fv4P11370 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Fv4P11370 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Fv4P11370 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Fv4P11370 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Fv4P11370 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Fv4P11370 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fv4P11370 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fv4P11370 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fv4P11370 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fv4P11370 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Fv4P11370 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fv4P11370 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fv4P11370 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Fv4P11370 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Fv4P11370 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fv4P11370 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Fv4P11370 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fv4P11370 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fv4P11370 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Fv4P11370 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.69□□□□□ -0.22
Fv4P11370 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fv4P11370 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Fv4P11370 Gm38225-201ENSMUST00000194001 393 ntBASIC13.69□□□□□ -0.22
Fv4P11370 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fv4P11370 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Fv4P11370 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fv4P11370 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fv4P11370 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fv4P11370 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fv4P11370 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fv4P11370 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fv4P11370 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fv4P11370 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Fv4P11370 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fv4P11370 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.68□□□□□ -0.22
Fv4P11370 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.68□□□□□ -0.22
Fv4P11370 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.68□□□□□ -0.22
Fv4P11370 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.68□□□□□ -0.22
Fv4P11370 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Fv4P11370 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Fv4P11370 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fv4P11370 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fv4P11370 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fv4P11370 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fv4P11370 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fv4P11370 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fv4P11370 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fv4P11370 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fv4P11370 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fv4P11370 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.68□□□□□ -0.22
Fv4P11370 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fv4P11370 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Fv4P11370 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.68□□□□□ -0.22
Fv4P11370 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.68□□□□□ -0.22
Fv4P11370 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.68□□□□□ -0.22
Fv4P11370 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.68□□□□□ -0.22
Fv4P11370 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fv4P11370 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Fv4P11370 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fv4P11370 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fv4P11370 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fv4P11370 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.68□□□□□ -0.22
Fv4P11370 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.68□□□□□ -0.22
Fv4P11370 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Fv4P11370 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Fv4P11370 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fv4P11370 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fv4P11370 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Fv4P11370 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Fv4P11370 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Fv4P11370 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fv4P11370 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fv4P11370 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Fv4P11370 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fv4P11370 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Fv4P11370 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.67□□□□□ -0.22
Fv4P11370 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Fv4P11370 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fv4P11370 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fv4P11370 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fv4P11370 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fv4P11370 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Fv4P11370 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fv4P11370 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Fv4P11370 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fv4P11370 Rprl2-201ENSMUST00000157150 290 ntBASIC13.67□□□□□ -0.22
Fv4P11370 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.67□□□□□ -0.22
Fv4P11370 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fv4P11370 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Fv4P11370 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Fv4P11370 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fv4P11370 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Fv4P11370 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.67□□□□□ -0.22
Fv4P11370 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fv4P11370 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 220.8 ms