Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Gm12813-201ENSMUST00000119615 902 ntBASIC14.07□□□□□ -0.16
Hoxb3P09026 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxb3P09026 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxb3P09026 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxb3P09026 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.07□□□□□ -0.16
Hoxb3P09026 Gm28760-201ENSMUST00000185995 736 ntBASIC14.07□□□□□ -0.16
Hoxb3P09026 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC14.07□□□□□ -0.16
Hoxb3P09026 Gm38266-201ENSMUST00000194931 421 ntBASIC14.07□□□□□ -0.16
Hoxb3P09026 Gm42997-202ENSMUST00000200321 985 ntBASIC14.07□□□□□ -0.16
Hoxb3P09026 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxb3P09026 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.07□□□□□ -0.16
Hoxb3P09026 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxb3P09026 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Hoxb3P09026 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxb3P09026 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxb3P09026 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Hoxb3P09026 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxb3P09026 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxb3P09026 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxb3P09026 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxb3P09026 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxb3P09026 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Hoxb3P09026 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxb3P09026 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxb3P09026 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.07□□□□□ -0.16
Hoxb3P09026 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxb3P09026 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Hoxb3P09026 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.07□□□□□ -0.16
Hoxb3P09026 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxb3P09026 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxb3P09026 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Hoxb3P09026 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxb3P09026 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxb3P09026 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxb3P09026 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.06□□□□□ -0.16
Hoxb3P09026 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxb3P09026 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxb3P09026 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxb3P09026 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Hoxb3P09026 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxb3P09026 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxb3P09026 Gm12439-201ENSMUST00000117162 365 ntBASIC14.06□□□□□ -0.16
Hoxb3P09026 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.06□□□□□ -0.16
Hoxb3P09026 Gm6244-201ENSMUST00000178732 841 ntBASIC14.06□□□□□ -0.16
Hoxb3P09026 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxb3P09026 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC14.06□□□□□ -0.16
Hoxb3P09026 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxb3P09026 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Hoxb3P09026 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxb3P09026 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxb3P09026 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxb3P09026 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Hoxb3P09026 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxb3P09026 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Hoxb3P09026 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxb3P09026 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Hoxb3P09026 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Hoxb3P09026 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxb3P09026 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.06□□□□□ -0.16
Hoxb3P09026 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxb3P09026 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxb3P09026 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxb3P09026 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxb3P09026 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxb3P09026 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxb3P09026 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.05□□□□□ -0.16
Hoxb3P09026 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxb3P09026 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxb3P09026 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxb3P09026 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxb3P09026 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxb3P09026 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxb3P09026 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxb3P09026 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxb3P09026 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxb3P09026 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxb3P09026 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Hoxb3P09026 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Hoxb3P09026 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
Hoxb3P09026 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.05□□□□□ -0.16
Hoxb3P09026 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Hoxb3P09026 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxb3P09026 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxb3P09026 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxb3P09026 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxb3P09026 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Hoxb3P09026 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxb3P09026 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Hoxb3P09026 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Hoxb3P09026 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxb3P09026 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxb3P09026 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxb3P09026 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxb3P09026 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxb3P09026 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxb3P09026 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxb3P09026 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxb3P09026 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxb3P09026 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.05□□□□□ -0.16
Hoxb3P09026 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms