Protein–RNA interactions for Protein: P01736

T-cell receptor beta chain V region PHDS203 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01736 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01736 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01736 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01736 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC10.53□□□□□ -0.72
P01736 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01736 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01736 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01736 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC10.53□□□□□ -0.72
P01736 Gm8097-201ENSMUST00000117903 829 ntBASIC10.53□□□□□ -0.72
P01736 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC10.53□□□□□ -0.72
P01736 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
P01736 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
P01736 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01736 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01736 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC10.53□□□□□ -0.72
P01736 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01736 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01736 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.53□□□□□ -0.72
P01736 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01736 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01736 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01736 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01736 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01736 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01736 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01736 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
P01736 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
P01736 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01736 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01736 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01736 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC10.53□□□□□ -0.72
P01736 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC10.52□□□□□ -0.72
P01736 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC10.52□□□□□ -0.72
P01736 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
P01736 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC10.52□□□□□ -0.72
P01736 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
P01736 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
P01736 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
P01736 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
P01736 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC10.52□□□□□ -0.72
P01736 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
P01736 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
P01736 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
P01736 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01736 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01736 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P01736 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01736 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01736 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01736 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
P01736 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
P01736 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC10.52□□□□□ -0.73
P01736 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC10.52□□□□□ -0.73
P01736 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P01736 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01736 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01736 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
P01736 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01736 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01736 Gm37795-201ENSMUST00000194216 2459 ntBASIC10.52□□□□□ -0.73
P01736 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P01736 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01736 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01736 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01736 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01736 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC10.52□□□□□ -0.73
P01736 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01736 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01736 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01736 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01736 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
P01736 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01736 Gm42480-201ENSMUST00000198434 2595 ntBASIC10.52□□□□□ -0.73
P01736 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
P01736 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01736 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC10.52□□□□□ -0.73
P01736 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
P01736 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01736 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01736 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01736 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
P01736 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P01736 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
P01736 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01736 Gm43061-201ENSMUST00000198850 2241 ntBASIC10.52□□□□□ -0.73
P01736 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
P01736 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
P01736 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P01736 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.51□□□□□ -0.73
P01736 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P01736 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P01736 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
P01736 Gm9924-202ENSMUST00000192760 2311 ntBASIC10.51□□□□□ -0.73
P01736 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P01736 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
P01736 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P01736 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P01736 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P01736 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P01736 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms