Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.08□□□□□ -0.15
Ldb2O55203 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ldb2O55203 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ldb2O55203 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ldb2O55203 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ldb2O55203 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ldb2O55203 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ldb2O55203 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ldb2O55203 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb2O55203 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb2O55203 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ldb2O55203 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb2O55203 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb2O55203 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb2O55203 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb2O55203 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb2O55203 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb2O55203 AA543401-201ENSMUST00000164248 1269 ntBASIC14.08□□□□□ -0.16
Ldb2O55203 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb2O55203 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ldb2O55203 Gm27533-201ENSMUST00000183800 152 ntBASIC14.08□□□□□ -0.16
Ldb2O55203 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.08□□□□□ -0.16
Ldb2O55203 Shd-206ENSMUST00000225145 998 ntBASIC14.08□□□□□ -0.16
Ldb2O55203 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.08□□□□□ -0.16
Ldb2O55203 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb2O55203 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.08□□□□□ -0.16
Ldb2O55203 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ldb2O55203 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb2O55203 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb2O55203 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb2O55203 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb2O55203 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb2O55203 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb2O55203 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb2O55203 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb2O55203 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb2O55203 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.08□□□□□ -0.16
Ldb2O55203 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb2O55203 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb2O55203 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ldb2O55203 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ldb2O55203 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb2O55203 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb2O55203 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.07□□□□□ -0.16
Ldb2O55203 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.07□□□□□ -0.16
Ldb2O55203 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb2O55203 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.07□□□□□ -0.16
Ldb2O55203 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb2O55203 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb2O55203 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb2O55203 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb2O55203 Gm8410-201ENSMUST00000117225 605 ntBASIC14.07□□□□□ -0.16
Ldb2O55203 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.07□□□□□ -0.16
Ldb2O55203 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb2O55203 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.07□□□□□ -0.16
Ldb2O55203 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.07□□□□□ -0.16
Ldb2O55203 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb2O55203 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ldb2O55203 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.07□□□□□ -0.16
Ldb2O55203 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Ldb2O55203 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb2O55203 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb2O55203 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb2O55203 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb2O55203 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb2O55203 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb2O55203 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb2O55203 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb2O55203 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb2O55203 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb2O55203 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb2O55203 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb2O55203 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb2O55203 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.06□□□□□ -0.16
Ldb2O55203 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb2O55203 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb2O55203 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb2O55203 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb2O55203 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb2O55203 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb2O55203 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Ldb2O55203 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb2O55203 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb2O55203 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb2O55203 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb2O55203 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb2O55203 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Ldb2O55203 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb2O55203 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb2O55203 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb2O55203 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb2O55203 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ldb2O55203 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb2O55203 Gm15920-201ENSMUST00000118998 402 ntBASIC14.06□□□□□ -0.16
Ldb2O55203 Mir1897-201ENSMUST00000122581 272 ntBASIC14.06□□□□□ -0.16
Ldb2O55203 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb2O55203 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.06□□□□□ -0.16
Ldb2O55203 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.06□□□□□ -0.16
Ldb2O55203 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.06□□□□□ -0.16
Ldb2O55203 Gm22175-201ENSMUST00000175007 78 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms