Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pde6dO55057 Gm18489-201ENSMUST00000172565 551 ntBASIC11.16□□□□□ -0.62
Pde6dO55057 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pde6dO55057 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC11.16□□□□□ -0.62
Pde6dO55057 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pde6dO55057 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pde6dO55057 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pde6dO55057 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pde6dO55057 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pde6dO55057 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pde6dO55057 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pde6dO55057 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Pde6dO55057 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.16□□□□□ -0.62
Pde6dO55057 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Pde6dO55057 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pde6dO55057 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pde6dO55057 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pde6dO55057 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.16□□□□□ -0.62
Pde6dO55057 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Pde6dO55057 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pde6dO55057 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.15□□□□□ -0.62
Pde6dO55057 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Pde6dO55057 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pde6dO55057 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pde6dO55057 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pde6dO55057 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pde6dO55057 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pde6dO55057 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pde6dO55057 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pde6dO55057 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pde6dO55057 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.15□□□□□ -0.62
Pde6dO55057 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pde6dO55057 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pde6dO55057 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC11.15□□□□□ -0.62
Pde6dO55057 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pde6dO55057 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC11.15□□□□□ -0.62
Pde6dO55057 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pde6dO55057 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.15□□□□□ -0.62
Pde6dO55057 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC11.15□□□□□ -0.62
Pde6dO55057 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.15□□□□□ -0.62
Pde6dO55057 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.15□□□□□ -0.62
Pde6dO55057 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pde6dO55057 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.15□□□□□ -0.62
Pde6dO55057 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pde6dO55057 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pde6dO55057 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pde6dO55057 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.15□□□□□ -0.62
Pde6dO55057 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pde6dO55057 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pde6dO55057 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pde6dO55057 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Pde6dO55057 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pde6dO55057 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pde6dO55057 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pde6dO55057 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Pde6dO55057 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Pde6dO55057 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Pde6dO55057 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Pde6dO55057 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Pde6dO55057 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Pde6dO55057 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.15□□□□□ -0.63
Pde6dO55057 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Pde6dO55057 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pde6dO55057 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pde6dO55057 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pde6dO55057 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pde6dO55057 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Pde6dO55057 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.14□□□□□ -0.63
Pde6dO55057 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pde6dO55057 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pde6dO55057 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pde6dO55057 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pde6dO55057 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pde6dO55057 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Pde6dO55057 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pde6dO55057 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pde6dO55057 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.14□□□□□ -0.63
Pde6dO55057 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pde6dO55057 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pde6dO55057 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pde6dO55057 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.14□□□□□ -0.63
Pde6dO55057 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC11.14□□□□□ -0.63
Pde6dO55057 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC11.14□□□□□ -0.63
Pde6dO55057 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC11.14□□□□□ -0.63
Pde6dO55057 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC11.14□□□□□ -0.63
Pde6dO55057 Olfr286-202ENSMUST00000205305 969 ntBASIC11.14□□□□□ -0.63
Pde6dO55057 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC11.14□□□□□ -0.63
Pde6dO55057 Gm7506-201ENSMUST00000207758 815 ntBASIC11.14□□□□□ -0.63
Pde6dO55057 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC11.14□□□□□ -0.63
Pde6dO55057 Gm18032-201ENSMUST00000222541 538 ntBASIC11.14□□□□□ -0.63
Pde6dO55057 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC11.14□□□□□ -0.63
Pde6dO55057 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pde6dO55057 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pde6dO55057 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pde6dO55057 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pde6dO55057 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pde6dO55057 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pde6dO55057 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.14□□□□□ -0.63
Pde6dO55057 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pde6dO55057 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms