Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Matn3O35701 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
Matn3O35701 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.88□□□□□ -0.35
Matn3O35701 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
Matn3O35701 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Matn3O35701 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.88□□□□□ -0.35
Matn3O35701 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Matn3O35701 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Matn3O35701 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Matn3O35701 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.88□□□□□ -0.35
Matn3O35701 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Matn3O35701 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Matn3O35701 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Matn3O35701 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Matn3O35701 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Matn3O35701 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.88□□□□□ -0.35
Matn3O35701 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Matn3O35701 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Matn3O35701 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Matn3O35701 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Matn3O35701 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Matn3O35701 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.88□□□□□ -0.35
Matn3O35701 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Matn3O35701 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Matn3O35701 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Matn3O35701 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Matn3O35701 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Matn3O35701 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.87□□□□□ -0.35
Matn3O35701 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Matn3O35701 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Matn3O35701 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Matn3O35701 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Matn3O35701 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.87□□□□□ -0.35
Matn3O35701 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Matn3O35701 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Matn3O35701 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Matn3O35701 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Matn3O35701 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Matn3O35701 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Matn3O35701 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Matn3O35701 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Matn3O35701 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Matn3O35701 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Matn3O35701 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Matn3O35701 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Matn3O35701 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Matn3O35701 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Matn3O35701 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Matn3O35701 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Matn3O35701 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Matn3O35701 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Matn3O35701 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.87□□□□□ -0.35
Matn3O35701 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Matn3O35701 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Matn3O35701 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Matn3O35701 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Matn3O35701 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Matn3O35701 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Matn3O35701 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Matn3O35701 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.87□□□□□ -0.35
Matn3O35701 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Matn3O35701 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Matn3O35701 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Matn3O35701 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Matn3O35701 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Matn3O35701 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Matn3O35701 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Matn3O35701 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.87□□□□□ -0.35
Matn3O35701 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Matn3O35701 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Matn3O35701 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Matn3O35701 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.86□□□□□ -0.35
Matn3O35701 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Matn3O35701 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Matn3O35701 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Matn3O35701 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Matn3O35701 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Matn3O35701 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Matn3O35701 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Matn3O35701 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Matn3O35701 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Matn3O35701 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Matn3O35701 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Matn3O35701 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Matn3O35701 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Matn3O35701 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.86□□□□□ -0.35
Matn3O35701 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Matn3O35701 Gm18733-201ENSMUST00000173950 856 ntBASIC12.86□□□□□ -0.35
Matn3O35701 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Matn3O35701 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.86□□□□□ -0.35
Matn3O35701 Gm27646-201ENSMUST00000183989 110 ntBASIC12.86□□□□□ -0.35
Matn3O35701 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.86□□□□□ -0.35
Matn3O35701 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Matn3O35701 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Matn3O35701 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.86□□□□□ -0.35
Matn3O35701 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.86□□□□□ -0.35
Matn3O35701 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC12.86□□□□□ -0.35
Matn3O35701 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Matn3O35701 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.86□□□□□ -0.35
Matn3O35701 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms