Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Gm15653-201ENSMUST00000119247 907 ntBASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cpsf4lE9Q2N0 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Gm46209-201ENSMUST00000217912 553 ntBASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4lE9Q2N0 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms