Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC13.83□□□□□ -0.19
Col6a3E9PWQ3 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
Col6a3E9PWQ3 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col6a3E9PWQ3 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col6a3E9PWQ3 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col6a3E9PWQ3 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col6a3E9PWQ3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a3E9PWQ3 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a3E9PWQ3 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a3E9PWQ3 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.83□□□□□ -0.2
Col6a3E9PWQ3 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a3E9PWQ3 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a3E9PWQ3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a3E9PWQ3 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a3E9PWQ3 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Col6a3E9PWQ3 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a3E9PWQ3 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.83□□□□□ -0.2
Col6a3E9PWQ3 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Col6a3E9PWQ3 AC169511.2-201ENSMUST00000226674 2063 ntBASIC13.83□□□□□ -0.2
Col6a3E9PWQ3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a3E9PWQ3 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a3E9PWQ3 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.83□□□□□ -0.2
Col6a3E9PWQ3 Gm8749-201ENSMUST00000117737 331 ntBASIC13.83□□□□□ -0.2
Col6a3E9PWQ3 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC13.83□□□□□ -0.2
Col6a3E9PWQ3 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.83□□□□□ -0.2
Col6a3E9PWQ3 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.83□□□□□ -0.2
Col6a3E9PWQ3 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.83□□□□□ -0.2
Col6a3E9PWQ3 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a3E9PWQ3 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a3E9PWQ3 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a3E9PWQ3 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a3E9PWQ3 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a3E9PWQ3 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a3E9PWQ3 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a3E9PWQ3 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a3E9PWQ3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a3E9PWQ3 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a3E9PWQ3 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
Col6a3E9PWQ3 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a3E9PWQ3 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Col6a3E9PWQ3 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a3E9PWQ3 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.82□□□□□ -0.2
Col6a3E9PWQ3 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a3E9PWQ3 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.82□□□□□ -0.2
Col6a3E9PWQ3 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a3E9PWQ3 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a3E9PWQ3 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a3E9PWQ3 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a3E9PWQ3 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a3E9PWQ3 Gm13600-201ENSMUST00000117949 744 ntBASIC13.82□□□□□ -0.2
Col6a3E9PWQ3 Gm6630-201ENSMUST00000119199 454 ntBASIC13.82□□□□□ -0.2
Col6a3E9PWQ3 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.82□□□□□ -0.2
Col6a3E9PWQ3 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.82□□□□□ -0.2
Col6a3E9PWQ3 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.82□□□□□ -0.2
Col6a3E9PWQ3 Gm10051-201ENSMUST00000145209 414 ntBASIC13.82□□□□□ -0.2
Col6a3E9PWQ3 Gm23153-201ENSMUST00000175323 313 ntBASIC13.82□□□□□ -0.2
Col6a3E9PWQ3 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a3E9PWQ3 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a3E9PWQ3 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Col6a3E9PWQ3 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a3E9PWQ3 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a3E9PWQ3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Col6a3E9PWQ3 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Col6a3E9PWQ3 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a3E9PWQ3 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC13.82□□□□□ -0.2
Col6a3E9PWQ3 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a3E9PWQ3 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a3E9PWQ3 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.82□□□□□ -0.2
Col6a3E9PWQ3 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Col6a3E9PWQ3 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a3E9PWQ3 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a3E9PWQ3 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Col6a3E9PWQ3 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a3E9PWQ3 Gm25214-201ENSMUST00000104573 129 ntBASIC13.81□□□□□ -0.2
Col6a3E9PWQ3 Gm13385-201ENSMUST00000121089 220 ntBASIC13.81□□□□□ -0.2
Col6a3E9PWQ3 Gm37042-201ENSMUST00000193816 581 ntBASIC13.81□□□□□ -0.2
Col6a3E9PWQ3 Gm43778-201ENSMUST00000199438 199 ntBASIC13.81□□□□□ -0.2
Col6a3E9PWQ3 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.81□□□□□ -0.2
Col6a3E9PWQ3 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a3E9PWQ3 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Col6a3E9PWQ3 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a3E9PWQ3 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a3E9PWQ3 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.81□□□□□ -0.2
Col6a3E9PWQ3 Gm9062-201ENSMUST00000117712 727 ntBASIC13.81□□□□□ -0.2
Col6a3E9PWQ3 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a3E9PWQ3 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Col6a3E9PWQ3 Gm9358-201ENSMUST00000183067 927 ntBASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms