Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm12887B1AVM1 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Gm12887B1AVM1 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Gm12887B1AVM1 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.57
Gm12887B1AVM1 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm12887B1AVM1 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm12887B1AVM1 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Gm12887B1AVM1 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm12887B1AVM1 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.46□□□□□ -0.57
Gm12887B1AVM1 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Gm12887B1AVM1 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Gm12887B1AVM1 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Gm12887B1AVM1 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC11.46□□□□□ -0.57
Gm12887B1AVM1 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm12887B1AVM1 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm12887B1AVM1 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Gm12887B1AVM1 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm12887B1AVM1 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
Gm12887B1AVM1 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm12887B1AVM1 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.46□□□□□ -0.57
Gm12887B1AVM1 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC11.46□□□□□ -0.57
Gm12887B1AVM1 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC11.46□□□□□ -0.57
Gm12887B1AVM1 AC160338.1-201ENSMUST00000214232 705 ntBASIC11.46□□□□□ -0.57
Gm12887B1AVM1 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm12887B1AVM1 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm12887B1AVM1 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Gm12887B1AVM1 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Gm12887B1AVM1 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC11.46□□□□□ -0.58
Gm12887B1AVM1 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Gm12887B1AVM1 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Gm12887B1AVM1 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Gm12887B1AVM1 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Gm12887B1AVM1 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Gm12887B1AVM1 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Gm12887B1AVM1 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Gm12887B1AVM1 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC11.45□□□□□ -0.58
Gm12887B1AVM1 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 Gm5682-201ENSMUST00000173402 505 ntBASIC11.45□□□□□ -0.58
Gm12887B1AVM1 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.45□□□□□ -0.58
Gm12887B1AVM1 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.45□□□□□ -0.58
Gm12887B1AVM1 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 AC025913.2-201ENSMUST00000220136 1766 ntBASIC11.45□□□□□ -0.58
Gm12887B1AVM1 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.45□□□□□ -0.58
Gm12887B1AVM1 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Gm12887B1AVM1 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms