Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm5639-201ENSMUST00000122305 2403 ntBASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm13836-201ENSMUST00000121159 501 ntBASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm43767-201ENSMUST00000198933 381 ntBASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm12895-201ENSMUST00000122214 226 ntBASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm13830-205ENSMUST00000201195 1155 ntBASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm10313-201ENSMUST00000095320 1002 ntBASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms