Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 Gm43332-201ENSMUST00000202511 1044 ntBASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6d-5A0A075B6B9 Gm13233-201ENSMUST00000118760 1443 ntBASIC11.43□□□□□ -0.58
Trav6d-5A0A075B6B9 Gm13244-201ENSMUST00000118855 1446 ntBASIC11.43□□□□□ -0.58
Trav6d-5A0A075B6B9 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-5A0A075B6B9 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.43□□□□□ -0.58
Trav6d-5A0A075B6B9 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-5A0A075B6B9 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-5A0A075B6B9 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Trav6d-5A0A075B6B9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-5A0A075B6B9 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-5A0A075B6B9 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-5A0A075B6B9 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav6d-5A0A075B6B9 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.43□□□□□ -0.58
Trav6d-5A0A075B6B9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-5A0A075B6B9 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-5A0A075B6B9 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav6d-5A0A075B6B9 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-5A0A075B6B9 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav6d-5A0A075B6B9 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav6d-5A0A075B6B9 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-5A0A075B6B9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trav6d-5A0A075B6B9 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-5A0A075B6B9 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-5A0A075B6B9 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trav6d-5A0A075B6B9 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Trav6d-5A0A075B6B9 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-5A0A075B6B9 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-5A0A075B6B9 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-5A0A075B6B9 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-5A0A075B6B9 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trav6d-5A0A075B6B9 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-5A0A075B6B9 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms