Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Gm12892-201ENSMUST00000117367 1146 ntBASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5-4A0A075B652 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 Gm5479-201ENSMUST00000160578 435 ntBASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 Klk2-ps-201ENSMUST00000205342 571 ntBASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 AC090659.1-201ENSMUST00000224334 768 ntBASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5-4A0A075B652 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav5-4A0A075B652 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav5-4A0A075B652 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Trav5-4A0A075B652 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav5-4A0A075B652 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav5-4A0A075B652 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms