Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.34□□□□□ -0.11
Rnf4Q9QZS2 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf4Q9QZS2 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf4Q9QZS2 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf4Q9QZS2 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.34□□□□□ -0.11
Rnf4Q9QZS2 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.34□□□□□ -0.11
Rnf4Q9QZS2 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf4Q9QZS2 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.34□□□□□ -0.11
Rnf4Q9QZS2 Gm9682-201ENSMUST00000197505 556 ntBASIC14.34□□□□□ -0.11
Rnf4Q9QZS2 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf4Q9QZS2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf4Q9QZS2 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf4Q9QZS2 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf4Q9QZS2 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf4Q9QZS2 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf4Q9QZS2 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf4Q9QZS2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf4Q9QZS2 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf4Q9QZS2 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf4Q9QZS2 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.34□□□□□ -0.11
Rnf4Q9QZS2 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf4Q9QZS2 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.33□□□□□ -0.11
Rnf4Q9QZS2 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf4Q9QZS2 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf4Q9QZS2 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf4Q9QZS2 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf4Q9QZS2 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.33□□□□□ -0.11
Rnf4Q9QZS2 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf4Q9QZS2 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf4Q9QZS2 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.33□□□□□ -0.12
Rnf4Q9QZS2 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.33□□□□□ -0.12
Rnf4Q9QZS2 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf4Q9QZS2 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rnf4Q9QZS2 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf4Q9QZS2 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf4Q9QZS2 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.33□□□□□ -0.12
Rnf4Q9QZS2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf4Q9QZS2 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.33□□□□□ -0.12
Rnf4Q9QZS2 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.33□□□□□ -0.12
Rnf4Q9QZS2 Gm25016-201ENSMUST00000158399 131 ntBASIC14.33□□□□□ -0.12
Rnf4Q9QZS2 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.33□□□□□ -0.12
Rnf4Q9QZS2 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf4Q9QZS2 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf4Q9QZS2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Rnf4Q9QZS2 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf4Q9QZS2 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Rnf4Q9QZS2 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf4Q9QZS2 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.33□□□□□ -0.12
Rnf4Q9QZS2 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf4Q9QZS2 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.33□□□□□ -0.12
Rnf4Q9QZS2 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf4Q9QZS2 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf4Q9QZS2 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf4Q9QZS2 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf4Q9QZS2 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Rnf4Q9QZS2 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.33□□□□□ -0.12
Rnf4Q9QZS2 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf4Q9QZS2 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rnf4Q9QZS2 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.32□□□□□ -0.12
Rnf4Q9QZS2 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf4Q9QZS2 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf4Q9QZS2 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rnf4Q9QZS2 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf4Q9QZS2 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.32□□□□□ -0.12
Rnf4Q9QZS2 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf4Q9QZS2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rnf4Q9QZS2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf4Q9QZS2 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf4Q9QZS2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.32□□□□□ -0.12
Rnf4Q9QZS2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf4Q9QZS2 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rnf4Q9QZS2 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rnf4Q9QZS2 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf4Q9QZS2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rnf4Q9QZS2 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf4Q9QZS2 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf4Q9QZS2 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf4Q9QZS2 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf4Q9QZS2 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf4Q9QZS2 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf4Q9QZS2 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf4Q9QZS2 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf4Q9QZS2 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf4Q9QZS2 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.32□□□□□ -0.12
Rnf4Q9QZS2 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf4Q9QZS2 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf4Q9QZS2 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rnf4Q9QZS2 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Rnf4Q9QZS2 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf4Q9QZS2 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms