Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 Gm11543-201ENSMUST00000120758 370 ntBASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Gm26308-201ENSMUST00000157768 69 ntBASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Gm5479-201ENSMUST00000160578 435 ntBASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a2Q9JLR1 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Sec61a2Q9JLR1 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sec61a2Q9JLR1 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.79□□□□□ -0.36
Sec61a2Q9JLR1 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sec61a2Q9JLR1 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sec61a2Q9JLR1 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Sec61a2Q9JLR1 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sec61a2Q9JLR1 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.79□□□□□ -0.36
Sec61a2Q9JLR1 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sec61a2Q9JLR1 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sec61a2Q9JLR1 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sec61a2Q9JLR1 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sec61a2Q9JLR1 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.79□□□□□ -0.36
Sec61a2Q9JLR1 Mir1895-201ENSMUST00000122615 79 ntBASIC12.79□□□□□ -0.36
Sec61a2Q9JLR1 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.79□□□□□ -0.36
Sec61a2Q9JLR1 Gm27920-201ENSMUST00000183953 96 ntBASIC12.79□□□□□ -0.36
Sec61a2Q9JLR1 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Sec61a2Q9JLR1 Gm44335-201ENSMUST00000196879 141 ntBASIC12.79□□□□□ -0.36
Sec61a2Q9JLR1 Gm44297-201ENSMUST00000198304 141 ntBASIC12.79□□□□□ -0.36
Sec61a2Q9JLR1 Gm44346-201ENSMUST00000198851 141 ntBASIC12.79□□□□□ -0.36
Sec61a2Q9JLR1 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms