Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Upk1aQ9D132 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk1aQ9D132 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk1aQ9D132 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.44□□□□□ -0.26
Upk1aQ9D132 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk1aQ9D132 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk1aQ9D132 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk1aQ9D132 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk1aQ9D132 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
Upk1aQ9D132 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk1aQ9D132 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Upk1aQ9D132 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Upk1aQ9D132 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.44□□□□□ -0.26
Upk1aQ9D132 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Upk1aQ9D132 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Upk1aQ9D132 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Upk1aQ9D132 Gm25925-201ENSMUST00000158314 306 ntBASIC13.44□□□□□ -0.26
Upk1aQ9D132 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Upk1aQ9D132 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.44□□□□□ -0.26
Upk1aQ9D132 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.44□□□□□ -0.26
Upk1aQ9D132 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.44□□□□□ -0.26
Upk1aQ9D132 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.44□□□□□ -0.26
Upk1aQ9D132 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.44□□□□□ -0.26
Upk1aQ9D132 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.44□□□□□ -0.26
Upk1aQ9D132 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Upk1aQ9D132 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk1aQ9D132 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk1aQ9D132 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.44□□□□□ -0.26
Upk1aQ9D132 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.44□□□□□ -0.26
Upk1aQ9D132 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.44□□□□□ -0.26
Upk1aQ9D132 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk1aQ9D132 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk1aQ9D132 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk1aQ9D132 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.44□□□□□ -0.26
Upk1aQ9D132 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk1aQ9D132 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Upk1aQ9D132 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk1aQ9D132 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk1aQ9D132 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk1aQ9D132 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.44□□□□□ -0.26
Upk1aQ9D132 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk1aQ9D132 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Upk1aQ9D132 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1aQ9D132 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1aQ9D132 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1aQ9D132 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1aQ9D132 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1aQ9D132 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1aQ9D132 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Upk1aQ9D132 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1aQ9D132 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1aQ9D132 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1aQ9D132 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
Upk1aQ9D132 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1aQ9D132 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Upk1aQ9D132 Gm12350-201ENSMUST00000121208 462 ntBASIC13.43□□□□□ -0.26
Upk1aQ9D132 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.43□□□□□ -0.26
Upk1aQ9D132 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.43□□□□□ -0.26
Upk1aQ9D132 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1aQ9D132 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Upk1aQ9D132 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Upk1aQ9D132 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.43□□□□□ -0.26
Upk1aQ9D132 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1aQ9D132 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1aQ9D132 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.43□□□□□ -0.26
Upk1aQ9D132 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1aQ9D132 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1aQ9D132 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1aQ9D132 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Upk1aQ9D132 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1aQ9D132 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.43□□□□□ -0.26
Upk1aQ9D132 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Upk1aQ9D132 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1aQ9D132 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1aQ9D132 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1aQ9D132 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Upk1aQ9D132 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1aQ9D132 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1aQ9D132 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1aQ9D132 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1aQ9D132 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1aQ9D132 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1aQ9D132 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Upk1aQ9D132 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.42□□□□□ -0.26
Upk1aQ9D132 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1aQ9D132 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1aQ9D132 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.42□□□□□ -0.26
Upk1aQ9D132 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1aQ9D132 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Upk1aQ9D132 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
Upk1aQ9D132 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
Upk1aQ9D132 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.42□□□□□ -0.26
Upk1aQ9D132 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.42□□□□□ -0.26
Upk1aQ9D132 Gm10154-201ENSMUST00000084445 354 ntBASIC13.42□□□□□ -0.26
Upk1aQ9D132 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1aQ9D132 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1aQ9D132 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1aQ9D132 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Upk1aQ9D132 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1aQ9D132 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms