Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Gm2451-201ENSMUST00000199447 999 ntBASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Gm43347-201ENSMUST00000200226 580 ntBASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Gm10290-201ENSMUST00000200451 999 ntBASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Grk6-205ENSMUST00000224653 2976 ntBASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Chaf1bQ9D0N7 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Gm6550-201ENSMUST00000187574 993 ntBASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Gm6376-201ENSMUST00000209407 580 ntBASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms