Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssbp3Q9D032 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssbp3Q9D032 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ssbp3Q9D032 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssbp3Q9D032 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssbp3Q9D032 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.85□□□□□ -0.51
Ssbp3Q9D032 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssbp3Q9D032 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.85□□□□□ -0.51
Ssbp3Q9D032 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssbp3Q9D032 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssbp3Q9D032 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssbp3Q9D032 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ssbp3Q9D032 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ssbp3Q9D032 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ssbp3Q9D032 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.85□□□□□ -0.51
Ssbp3Q9D032 Gm27631-201ENSMUST00000184163 466 ntBASIC11.85□□□□□ -0.51
Ssbp3Q9D032 Gm27680-201ENSMUST00000184192 160 ntBASIC11.85□□□□□ -0.51
Ssbp3Q9D032 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ssbp3Q9D032 Gm45453-201ENSMUST00000211758 853 ntBASIC11.85□□□□□ -0.51
Ssbp3Q9D032 Dupd1-202ENSMUST00000224735 548 ntBASIC11.85□□□□□ -0.51
Ssbp3Q9D032 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.85□□□□□ -0.51
Ssbp3Q9D032 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssbp3Q9D032 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssbp3Q9D032 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ssbp3Q9D032 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.85□□□□□ -0.51
Ssbp3Q9D032 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.85□□□□□ -0.51
Ssbp3Q9D032 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssbp3Q9D032 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssbp3Q9D032 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssbp3Q9D032 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssbp3Q9D032 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ssbp3Q9D032 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssbp3Q9D032 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssbp3Q9D032 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.85□□□□□ -0.51
Ssbp3Q9D032 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssbp3Q9D032 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.85□□□□□ -0.51
Ssbp3Q9D032 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssbp3Q9D032 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Gm15653-201ENSMUST00000119247 907 ntBASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Gm14042-201ENSMUST00000120139 833 ntBASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Gm12151-201ENSMUST00000121374 290 ntBASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Mir7684-201ENSMUST00000183858 60 ntBASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Gm27306-201ENSMUST00000183970 107 ntBASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Gm27989-201ENSMUST00000184721 107 ntBASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC11.84□□□□□ -0.51
Ssbp3Q9D032 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Ssbp3Q9D032 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Ssbp3Q9D032 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Ssbp3Q9D032 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ssbp3Q9D032 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ssbp3Q9D032 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ssbp3Q9D032 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ssbp3Q9D032 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ssbp3Q9D032 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ssbp3Q9D032 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ssbp3Q9D032 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ssbp3Q9D032 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ssbp3Q9D032 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ssbp3Q9D032 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ssbp3Q9D032 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ssbp3Q9D032 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ssbp3Q9D032 Mir1897-201ENSMUST00000122581 272 ntBASIC11.83□□□□□ -0.52
Ssbp3Q9D032 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.83□□□□□ -0.52
Ssbp3Q9D032 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Ssbp3Q9D032 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms