Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hdhd3Q9CYW4 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hdhd3Q9CYW4 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Gm14042-201ENSMUST00000120139 833 ntBASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Gm43935-201ENSMUST00000203569 1050 ntBASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Gm45167-201ENSMUST00000208007 322 ntBASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hdhd3Q9CYW4 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hdhd3Q9CYW4 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hdhd3Q9CYW4 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.54□□□□□ -0.56
Hdhd3Q9CYW4 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hdhd3Q9CYW4 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hdhd3Q9CYW4 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Hdhd3Q9CYW4 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hdhd3Q9CYW4 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hdhd3Q9CYW4 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hdhd3Q9CYW4 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hdhd3Q9CYW4 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hdhd3Q9CYW4 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hdhd3Q9CYW4 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hdhd3Q9CYW4 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.54□□□□□ -0.56
Hdhd3Q9CYW4 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hdhd3Q9CYW4 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms