Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Gm29310-201ENSMUST00000185468 696 ntBASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Gm21825-201ENSMUST00000185728 696 ntBASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Gm29109-201ENSMUST00000185895 696 ntBASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Gm21896-201ENSMUST00000186520 696 ntBASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Gm21873-201ENSMUST00000186728 696 ntBASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Gm21794-201ENSMUST00000187056 696 ntBASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Gm21880-201ENSMUST00000187275 696 ntBASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Gm21826-201ENSMUST00000187451 696 ntBASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Gm21198-201ENSMUST00000188393 696 ntBASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Gm21749-201ENSMUST00000189343 696 ntBASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Gm21901-201ENSMUST00000189568 696 ntBASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Gm29424-201ENSMUST00000189716 696 ntBASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Gm28599-201ENSMUST00000189838 694 ntBASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Gm21867-201ENSMUST00000189917 696 ntBASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Gm29269-201ENSMUST00000190087 696 ntBASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Gm21722-201ENSMUST00000190153 696 ntBASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Gm28423-201ENSMUST00000190701 696 ntBASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Gm21899-201ENSMUST00000190745 696 ntBASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Gm21910-201ENSMUST00000191163 696 ntBASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Gm21849-201ENSMUST00000191571 696 ntBASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Gm28678-201ENSMUST00000191593 696 ntBASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Gm20910-201ENSMUST00000193268 696 ntBASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Gm21871-201ENSMUST00000194621 696 ntBASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Trim11Q99PQ2 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim11Q99PQ2 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trim11Q99PQ2 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.16■□□□□ 0.18
Trim11Q99PQ2 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.16■□□□□ 0.18
Trim11Q99PQ2 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim11Q99PQ2 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim11Q99PQ2 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.16■□□□□ 0.18
Trim11Q99PQ2 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim11Q99PQ2 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.16■□□□□ 0.18
Trim11Q99PQ2 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim11Q99PQ2 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim11Q99PQ2 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim11Q99PQ2 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim11Q99PQ2 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trim11Q99PQ2 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.16■□□□□ 0.18
Trim11Q99PQ2 Gm18889-201ENSMUST00000174284 929 ntBASIC16.16■□□□□ 0.18
Trim11Q99PQ2 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.16■□□□□ 0.18
Trim11Q99PQ2 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.16■□□□□ 0.18
Trim11Q99PQ2 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim11Q99PQ2 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim11Q99PQ2 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim11Q99PQ2 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim11Q99PQ2 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim11Q99PQ2 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim11Q99PQ2 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim11Q99PQ2 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim11Q99PQ2 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim11Q99PQ2 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.15■□□□□ 0.18
Trim11Q99PQ2 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim11Q99PQ2 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim11Q99PQ2 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim11Q99PQ2 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trim11Q99PQ2 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim11Q99PQ2 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim11Q99PQ2 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Trim11Q99PQ2 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.15■□□□□ 0.18
Trim11Q99PQ2 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trim11Q99PQ2 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.15■□□□□ 0.18
Trim11Q99PQ2 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim11Q99PQ2 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim11Q99PQ2 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim11Q99PQ2 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trim11Q99PQ2 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim11Q99PQ2 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim11Q99PQ2 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
Trim11Q99PQ2 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim11Q99PQ2 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trim11Q99PQ2 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC16.15■□□□□ 0.18
Trim11Q99PQ2 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim11Q99PQ2 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.18
Trim11Q99PQ2 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC16.14■□□□□ 0.18
Trim11Q99PQ2 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trim11Q99PQ2 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim11Q99PQ2 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Trim11Q99PQ2 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim11Q99PQ2 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms