Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Nkd1Q99MH6 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd1Q99MH6 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.39□□□□□ -0.27
Nkd1Q99MH6 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Nkd1Q99MH6 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.39□□□□□ -0.27
Nkd1Q99MH6 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd1Q99MH6 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.39□□□□□ -0.27
Nkd1Q99MH6 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd1Q99MH6 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd1Q99MH6 Gm14140-201ENSMUST00000119999 995 ntBASIC13.39□□□□□ -0.27
Nkd1Q99MH6 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd1Q99MH6 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.39□□□□□ -0.27
Nkd1Q99MH6 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.39□□□□□ -0.27
Nkd1Q99MH6 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd1Q99MH6 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd1Q99MH6 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd1Q99MH6 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd1Q99MH6 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd1Q99MH6 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd1Q99MH6 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd1Q99MH6 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd1Q99MH6 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd1Q99MH6 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Nkd1Q99MH6 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd1Q99MH6 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Nkd1Q99MH6 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd1Q99MH6 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd1Q99MH6 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd1Q99MH6 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 Mzt1-203ENSMUST00000227948 952 ntBASIC13.38□□□□□ -0.27
Nkd1Q99MH6 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.38□□□□□ -0.27
Nkd1Q99MH6 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.38□□□□□ -0.27
Nkd1Q99MH6 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nkd1Q99MH6 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkd1Q99MH6 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkd1Q99MH6 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkd1Q99MH6 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkd1Q99MH6 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkd1Q99MH6 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkd1Q99MH6 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkd1Q99MH6 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkd1Q99MH6 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkd1Q99MH6 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkd1Q99MH6 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Nkd1Q99MH6 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.37□□□□□ -0.27
Nkd1Q99MH6 Gm37230-201ENSMUST00000194491 818 ntBASIC13.37□□□□□ -0.27
Nkd1Q99MH6 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkd1Q99MH6 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkd1Q99MH6 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms