Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col20a1Q923P0 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col20a1Q923P0 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col20a1Q923P0 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col20a1Q923P0 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col20a1Q923P0 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col20a1Q923P0 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col20a1Q923P0 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.7■□□□□ 0.26
Col20a1Q923P0 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.7■□□□□ 0.26
Col20a1Q923P0 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col20a1Q923P0 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.7■□□□□ 0.26
Col20a1Q923P0 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col20a1Q923P0 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC16.7■□□□□ 0.26
Col20a1Q923P0 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Col20a1Q923P0 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col20a1Q923P0 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col20a1Q923P0 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col20a1Q923P0 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Col20a1Q923P0 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.69■□□□□ 0.26
Col20a1Q923P0 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col20a1Q923P0 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col20a1Q923P0 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.69■□□□□ 0.26
Col20a1Q923P0 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Col20a1Q923P0 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col20a1Q923P0 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Col20a1Q923P0 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col20a1Q923P0 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col20a1Q923P0 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col20a1Q923P0 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col20a1Q923P0 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col20a1Q923P0 Gm12341-201ENSMUST00000119724 503 ntBASIC16.69■□□□□ 0.26
Col20a1Q923P0 Gm13385-201ENSMUST00000121089 220 ntBASIC16.69■□□□□ 0.26
Col20a1Q923P0 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Col20a1Q923P0 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.69■□□□□ 0.26
Col20a1Q923P0 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.69■□□□□ 0.26
Col20a1Q923P0 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col20a1Q923P0 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col20a1Q923P0 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col20a1Q923P0 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col20a1Q923P0 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col20a1Q923P0 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col20a1Q923P0 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col20a1Q923P0 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col20a1Q923P0 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col20a1Q923P0 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col20a1Q923P0 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col20a1Q923P0 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col20a1Q923P0 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Col20a1Q923P0 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col20a1Q923P0 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Col20a1Q923P0 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Col20a1Q923P0 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col20a1Q923P0 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col20a1Q923P0 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC16.68■□□□□ 0.26
Col20a1Q923P0 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Col20a1Q923P0 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.68■□□□□ 0.26
Col20a1Q923P0 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.68■□□□□ 0.26
Col20a1Q923P0 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col20a1Q923P0 Gm12138-201ENSMUST00000122180 951 ntBASIC16.68■□□□□ 0.26
Col20a1Q923P0 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col20a1Q923P0 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col20a1Q923P0 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.68■□□□□ 0.26
Col20a1Q923P0 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.68■□□□□ 0.26
Col20a1Q923P0 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Col20a1Q923P0 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Col20a1Q923P0 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col20a1Q923P0 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col20a1Q923P0 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Col20a1Q923P0 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col20a1Q923P0 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col20a1Q923P0 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Col20a1Q923P0 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col20a1Q923P0 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col20a1Q923P0 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col20a1Q923P0 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col20a1Q923P0 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col20a1Q923P0 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col20a1Q923P0 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC16.67■□□□□ 0.26
Col20a1Q923P0 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col20a1Q923P0 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col20a1Q923P0 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Col20a1Q923P0 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Col20a1Q923P0 AC115735.4-201ENSMUST00000227460 1944 ntBASIC16.67■□□□□ 0.26
Col20a1Q923P0 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Col20a1Q923P0 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC16.67■□□□□ 0.26
Col20a1Q923P0 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Col20a1Q923P0 Gm7558-201ENSMUST00000193221 1165 ntBASIC16.67■□□□□ 0.26
Col20a1Q923P0 Gm45384-201ENSMUST00000210451 277 ntBASIC16.67■□□□□ 0.26
Col20a1Q923P0 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col20a1Q923P0 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col20a1Q923P0 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col20a1Q923P0 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col20a1Q923P0 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col20a1Q923P0 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col20a1Q923P0 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Col20a1Q923P0 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col20a1Q923P0 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col20a1Q923P0 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col20a1Q923P0 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col20a1Q923P0 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms