Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhb22Q91XZ8 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb22Q91XZ8 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.56■□□□□ 0.24
Pcdhb22Q91XZ8 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhb22Q91XZ8 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb22Q91XZ8 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb22Q91XZ8 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb22Q91XZ8 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb22Q91XZ8 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC16.56■□□□□ 0.24
Pcdhb22Q91XZ8 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb22Q91XZ8 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.56■□□□□ 0.24
Pcdhb22Q91XZ8 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.56■□□□□ 0.24
Pcdhb22Q91XZ8 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Pcdhb22Q91XZ8 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb22Q91XZ8 Gm43703-201ENSMUST00000200523 763 ntBASIC16.56■□□□□ 0.24
Pcdhb22Q91XZ8 Gm7775-201ENSMUST00000218871 853 ntBASIC16.56■□□□□ 0.24
Pcdhb22Q91XZ8 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb22Q91XZ8 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb22Q91XZ8 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb22Q91XZ8 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb22Q91XZ8 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb22Q91XZ8 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb22Q91XZ8 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb22Q91XZ8 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb22Q91XZ8 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb22Q91XZ8 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb22Q91XZ8 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhb22Q91XZ8 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb22Q91XZ8 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb22Q91XZ8 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb22Q91XZ8 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Pcdhb22Q91XZ8 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb22Q91XZ8 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb22Q91XZ8 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb22Q91XZ8 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb22Q91XZ8 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb22Q91XZ8 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.55■□□□□ 0.24
Pcdhb22Q91XZ8 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb22Q91XZ8 Gm15460-201ENSMUST00000118147 391 ntBASIC16.55■□□□□ 0.24
Pcdhb22Q91XZ8 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.55■□□□□ 0.24
Pcdhb22Q91XZ8 Gm3436-201ENSMUST00000179930 840 ntBASIC16.55■□□□□ 0.24
Pcdhb22Q91XZ8 Gm10576-201ENSMUST00000191927 825 ntBASIC16.55■□□□□ 0.24
Pcdhb22Q91XZ8 Gm18027-201ENSMUST00000218947 619 ntBASIC16.55■□□□□ 0.24
Pcdhb22Q91XZ8 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb22Q91XZ8 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb22Q91XZ8 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb22Q91XZ8 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Pcdhb22Q91XZ8 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb22Q91XZ8 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb22Q91XZ8 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb22Q91XZ8 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb22Q91XZ8 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 Gm37714-201ENSMUST00000194742 342 ntBASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb22Q91XZ8 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb22Q91XZ8 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhb22Q91XZ8 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb22Q91XZ8 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb22Q91XZ8 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb22Q91XZ8 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhb22Q91XZ8 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb22Q91XZ8 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb22Q91XZ8 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.53■□□□□ 0.24
Pcdhb22Q91XZ8 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Pcdhb22Q91XZ8 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb22Q91XZ8 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms