Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Mir3113-201ENSMUST00000175478 76 ntBASIC14.13□□□□□ -0.15
Pcdhb4Q91XZ6 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.13□□□□□ -0.15
Pcdhb4Q91XZ6 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.13□□□□□ -0.15
Pcdhb4Q91XZ6 Gm37230-201ENSMUST00000194491 818 ntBASIC14.13□□□□□ -0.15
Pcdhb4Q91XZ6 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.13□□□□□ -0.15
Pcdhb4Q91XZ6 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.13□□□□□ -0.15
Pcdhb4Q91XZ6 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb4Q91XZ6 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb4Q91XZ6 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb4Q91XZ6 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb4Q91XZ6 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.13□□□□□ -0.15
Pcdhb4Q91XZ6 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb4Q91XZ6 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Pcdhb4Q91XZ6 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb4Q91XZ6 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb4Q91XZ6 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb4Q91XZ6 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb4Q91XZ6 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb4Q91XZ6 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb4Q91XZ6 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb4Q91XZ6 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb4Q91XZ6 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.13□□□□□ -0.15
Pcdhb4Q91XZ6 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pcdhb4Q91XZ6 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Gm15427-201ENSMUST00000117288 531 ntBASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb4Q91XZ6 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb4Q91XZ6 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb4Q91XZ6 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb4Q91XZ6 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Pcdhb4Q91XZ6 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Pcdhb4Q91XZ6 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb4Q91XZ6 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.11□□□□□ -0.15
Pcdhb4Q91XZ6 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Pcdhb4Q91XZ6 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Pcdhb4Q91XZ6 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb4Q91XZ6 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.11□□□□□ -0.15
Pcdhb4Q91XZ6 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb4Q91XZ6 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.11□□□□□ -0.15
Pcdhb4Q91XZ6 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.11□□□□□ -0.15
Pcdhb4Q91XZ6 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb4Q91XZ6 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb4Q91XZ6 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb4Q91XZ6 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb4Q91XZ6 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb4Q91XZ6 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb4Q91XZ6 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb4Q91XZ6 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.11□□□□□ -0.15
Pcdhb4Q91XZ6 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb4Q91XZ6 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb4Q91XZ6 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb4Q91XZ6 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Pcdhb4Q91XZ6 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Pcdhb4Q91XZ6 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Pcdhb4Q91XZ6 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb4Q91XZ6 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb4Q91XZ6 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.1□□□□□ -0.15
Pcdhb4Q91XZ6 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 217.8 ms