Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.02□□□□□ -0.16
Vsx1Q91V10 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vsx1Q91V10 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vsx1Q91V10 Gm12585-201ENSMUST00000117307 290 ntBASIC14.02□□□□□ -0.17
Vsx1Q91V10 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.02□□□□□ -0.17
Vsx1Q91V10 Gm45784-201ENSMUST00000188360 142 ntBASIC14.02□□□□□ -0.17
Vsx1Q91V10 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vsx1Q91V10 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vsx1Q91V10 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vsx1Q91V10 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vsx1Q91V10 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vsx1Q91V10 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vsx1Q91V10 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vsx1Q91V10 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vsx1Q91V10 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vsx1Q91V10 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Vsx1Q91V10 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vsx1Q91V10 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Vsx1Q91V10 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.01□□□□□ -0.17
Vsx1Q91V10 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.01□□□□□ -0.17
Vsx1Q91V10 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Vsx1Q91V10 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Vsx1Q91V10 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vsx1Q91V10 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vsx1Q91V10 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vsx1Q91V10 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vsx1Q91V10 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Vsx1Q91V10 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vsx1Q91V10 Gm15393-201ENSMUST00000120499 219 ntBASIC14.01□□□□□ -0.17
Vsx1Q91V10 Mir1894-201ENSMUST00000122802 81 ntBASIC14.01□□□□□ -0.17
Vsx1Q91V10 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.01□□□□□ -0.17
Vsx1Q91V10 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.01□□□□□ -0.17
Vsx1Q91V10 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.01□□□□□ -0.17
Vsx1Q91V10 AC154171.1-201ENSMUST00000224610 643 ntBASIC14.01□□□□□ -0.17
Vsx1Q91V10 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vsx1Q91V10 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vsx1Q91V10 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vsx1Q91V10 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vsx1Q91V10 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Vsx1Q91V10 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vsx1Q91V10 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Vsx1Q91V10 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vsx1Q91V10 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vsx1Q91V10 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vsx1Q91V10 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vsx1Q91V10 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vsx1Q91V10 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14□□□□□ -0.17
Vsx1Q91V10 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Vsx1Q91V10 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Vsx1Q91V10 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vsx1Q91V10 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vsx1Q91V10 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Vsx1Q91V10 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vsx1Q91V10 Gm42853-201ENSMUST00000201273 1387 ntBASIC14□□□□□ -0.17
Vsx1Q91V10 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Vsx1Q91V10 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Vsx1Q91V10 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14□□□□□ -0.17
Vsx1Q91V10 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Vsx1Q91V10 Gm15460-201ENSMUST00000118147 391 ntBASIC14□□□□□ -0.17
Vsx1Q91V10 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vsx1Q91V10 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14□□□□□ -0.17
Vsx1Q91V10 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vsx1Q91V10 Snora78-201ENSMUST00000158630 128 ntBASIC14□□□□□ -0.17
Vsx1Q91V10 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Vsx1Q91V10 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vsx1Q91V10 Gm33320-201ENSMUST00000192232 530 ntBASIC14□□□□□ -0.17
Vsx1Q91V10 Gm37230-201ENSMUST00000194491 818 ntBASIC14□□□□□ -0.17
Vsx1Q91V10 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14□□□□□ -0.17
Vsx1Q91V10 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14□□□□□ -0.17
Vsx1Q91V10 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vsx1Q91V10 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vsx1Q91V10 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
Vsx1Q91V10 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14□□□□□ -0.17
Vsx1Q91V10 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vsx1Q91V10 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Vsx1Q91V10 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vsx1Q91V10 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vsx1Q91V10 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Vsx1Q91V10 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vsx1Q91V10 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vsx1Q91V10 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vsx1Q91V10 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vsx1Q91V10 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vsx1Q91V10 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vsx1Q91V10 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Vsx1Q91V10 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vsx1Q91V10 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Vsx1Q91V10 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Vsx1Q91V10 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.99□□□□□ -0.17
Vsx1Q91V10 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.99□□□□□ -0.17
Vsx1Q91V10 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx1Q91V10 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx1Q91V10 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx1Q91V10 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx1Q91V10 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx1Q91V10 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx1Q91V10 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Vsx1Q91V10 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx1Q91V10 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.99□□□□□ -0.17
Vsx1Q91V10 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms