Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Gtf3c5Q8R2T8 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gtf3c5Q8R2T8 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gtf3c5Q8R2T8 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Gtf3c5Q8R2T8 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gtf3c5Q8R2T8 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Gtf3c5Q8R2T8 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gtf3c5Q8R2T8 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gtf3c5Q8R2T8 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Gtf3c5Q8R2T8 Gm25144-201ENSMUST00000179561 110 ntBASIC16.77■□□□□ 0.28
Gtf3c5Q8R2T8 Gm25352-201ENSMUST00000179815 110 ntBASIC16.77■□□□□ 0.28
Gtf3c5Q8R2T8 Gm44872-201ENSMUST00000207864 420 ntBASIC16.77■□□□□ 0.28
Gtf3c5Q8R2T8 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gtf3c5Q8R2T8 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gtf3c5Q8R2T8 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gtf3c5Q8R2T8 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Gtf3c5Q8R2T8 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
Gtf3c5Q8R2T8 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC16.77■□□□□ 0.27
Gtf3c5Q8R2T8 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gtf3c5Q8R2T8 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gtf3c5Q8R2T8 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.77■□□□□ 0.27
Gtf3c5Q8R2T8 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Gtf3c5Q8R2T8 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gtf3c5Q8R2T8 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gtf3c5Q8R2T8 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Gtf3c5Q8R2T8 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gtf3c5Q8R2T8 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gtf3c5Q8R2T8 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.76■□□□□ 0.27
Gtf3c5Q8R2T8 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gtf3c5Q8R2T8 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gtf3c5Q8R2T8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gtf3c5Q8R2T8 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gtf3c5Q8R2T8 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.76■□□□□ 0.27
Gtf3c5Q8R2T8 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gtf3c5Q8R2T8 Gm10652-201ENSMUST00000199790 2622 ntBASIC16.76■□□□□ 0.27
Gtf3c5Q8R2T8 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.76■□□□□ 0.27
Gtf3c5Q8R2T8 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gtf3c5Q8R2T8 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gtf3c5Q8R2T8 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Gtf3c5Q8R2T8 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Gtf3c5Q8R2T8 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.76■□□□□ 0.27
Gtf3c5Q8R2T8 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gtf3c5Q8R2T8 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gtf3c5Q8R2T8 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Gtf3c5Q8R2T8 Ighv8-7-201ENSMUST00000194349 297 ntBASIC16.76■□□□□ 0.27
Gtf3c5Q8R2T8 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.76■□□□□ 0.27
Gtf3c5Q8R2T8 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC16.76■□□□□ 0.27
Gtf3c5Q8R2T8 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gtf3c5Q8R2T8 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gtf3c5Q8R2T8 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gtf3c5Q8R2T8 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Gtf3c5Q8R2T8 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Gtf3c5Q8R2T8 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gtf3c5Q8R2T8 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gtf3c5Q8R2T8 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Gtf3c5Q8R2T8 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gtf3c5Q8R2T8 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gtf3c5Q8R2T8 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gtf3c5Q8R2T8 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gtf3c5Q8R2T8 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Gtf3c5Q8R2T8 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gtf3c5Q8R2T8 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gtf3c5Q8R2T8 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gtf3c5Q8R2T8 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gtf3c5Q8R2T8 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.75■□□□□ 0.27
Gtf3c5Q8R2T8 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Gtf3c5Q8R2T8 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.75■□□□□ 0.27
Gtf3c5Q8R2T8 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.75■□□□□ 0.27
Gtf3c5Q8R2T8 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.75■□□□□ 0.27
Gtf3c5Q8R2T8 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Gtf3c5Q8R2T8 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gtf3c5Q8R2T8 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gtf3c5Q8R2T8 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Gtf3c5Q8R2T8 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gtf3c5Q8R2T8 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gtf3c5Q8R2T8 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Gtf3c5Q8R2T8 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Gtf3c5Q8R2T8 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gtf3c5Q8R2T8 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gtf3c5Q8R2T8 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
Gtf3c5Q8R2T8 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC16.75■□□□□ 0.27
Gtf3c5Q8R2T8 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gtf3c5Q8R2T8 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gtf3c5Q8R2T8 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gtf3c5Q8R2T8 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gtf3c5Q8R2T8 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Gtf3c5Q8R2T8 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Gtf3c5Q8R2T8 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gtf3c5Q8R2T8 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gtf3c5Q8R2T8 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.74■□□□□ 0.27
Gtf3c5Q8R2T8 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gtf3c5Q8R2T8 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.74■□□□□ 0.27
Gtf3c5Q8R2T8 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gtf3c5Q8R2T8 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gtf3c5Q8R2T8 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gtf3c5Q8R2T8 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gtf3c5Q8R2T8 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gtf3c5Q8R2T8 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Gtf3c5Q8R2T8 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gtf3c5Q8R2T8 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms