Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cystm1Q8K353 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Gm7222-201ENSMUST00000117512 906 ntBASIC8.93□□□□□ -0.98
Cystm1Q8K353 Gm4459-201ENSMUST00000118750 468 ntBASIC8.93□□□□□ -0.98
Cystm1Q8K353 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Gm12350-201ENSMUST00000121208 462 ntBASIC8.93□□□□□ -0.98
Cystm1Q8K353 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC8.93□□□□□ -0.98
Cystm1Q8K353 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Gm43073-201ENSMUST00000198200 1189 ntBASIC8.93□□□□□ -0.98
Cystm1Q8K353 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC8.93□□□□□ -0.98
Cystm1Q8K353 AV026068-213ENSMUST00000223675 1171 ntBASIC8.93□□□□□ -0.98
Cystm1Q8K353 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cystm1Q8K353 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Gm6858-201ENSMUST00000208582 1468 ntBASIC8.93□□□□□ -0.98
Cystm1Q8K353 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cystm1Q8K353 AC132265.1-201ENSMUST00000219233 1665 ntBASIC8.93□□□□□ -0.98
Cystm1Q8K353 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Cystm1Q8K353 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cystm1Q8K353 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC8.92□□□□□ -0.98
Cystm1Q8K353 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Cystm1Q8K353 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Cystm1Q8K353 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Gm37584-201ENSMUST00000193595 1290 ntBASIC8.92□□□□□ -0.98
Cystm1Q8K353 Gm6089-201ENSMUST00000197666 938 ntBASIC8.92□□□□□ -0.98
Cystm1Q8K353 Gm5712-201ENSMUST00000199748 1043 ntBASIC8.92□□□□□ -0.98
Cystm1Q8K353 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC8.92□□□□□ -0.98
Cystm1Q8K353 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cystm1Q8K353 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC8.92□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms